SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
P51855	Gss	ILSNNPSK	BrainStem	—	100.0	MRM+PRM	—
P51855	Gss	ILSNNPSK	Cerebellum	—	100.0	MRM+PRM	—
P51855	Gss	ILSNNPSK	kidney	—	100.0	MRM+PRM	—
P51855	Gss	ILSNNPSK	MockWholeBrain	—	100.0	MRM+PRM	—
P51859	Hdgf	DLFPYEESK	BrainStem	—	100.0	MRM+PRM	—
P51863	Atp6v0d1	ADDYEQVK	BrainStem	—	100.0	MRM+PRM	—
P51863	Atp6v0d1	ADDYEQVK	Cerebellum	—	100.0	MRM+PRM	—
P51863	Atp6v0d1	ADDYEQVK	kidney	—	100.0	MRM+PRM	—
P51863	Atp6v0d1	ADDYEQVK	MockWholeBrain	—	100.0	MRM+PRM	—
P51885	Lum	ISNIPDEYFK	BrainStem	—	100.0	MRM+PRM	—
P51885	Lum	ISNIPDEYFK	Cerebrum	—	100.0	MRM+PRM	—
P51885	Lum	ISNIPDEYFK	TailSkin	—	100.0	MRM+PRM	—
P52019	Sqle	ELHAPLTVVADGLFSK	BrainStem	—	100.0	MRM+PRM	—
P52019	Sqle	ELHAPLTVVADGLFSK	Cerebrum	—	100.0	MRM+PRM	—
P52019	Sqle	ELHAPLTVVADGLFSK	kidney	—	100.0	MRM+PRM	—
P52019	Sqle	ELHAPLTVVADGLFSK	liver	—	100.0	MRM+PRM	—
P52430	Pon1	LLIGTVFHK	kidney	—	100.0	MRM+PRM	—
P52430	Pon1	LLIGTVFHK	liver	—	100.0	MRM+PRM	—
P52430	Pon1	YVYIAELLAHK	kidney	—	100.0	MRM+PRM	—
P52430	Pon1	YVYIAELLAHK	liver	—	100.0	MRM+PRM	—
P52480	Pkm	GADFLVTEVENGGSLGSK	Cerebellum	—	100.0	MRM+PRM	—
P52480	Pkm	GADFLVTEVENGGSLGSK	Cerebrum	—	100.0	MRM+PRM	—
P52480	Pkm	GADFLVTEVENGGSLGSK	kidney	—	100.0	MRM+PRM	—
P52480	Pkm	GADFLVTEVENGGSLGSK	liver	—	100.0	MRM+PRM	—
P52480	Pkm	GADFLVTEVENGGSLGSK	TailSkin	—	100.0	MRM+PRM	—
P52480	Pkm	GDLGIEIPAEK	Cerebrum	—	100.0	MRM+PRM	—
P52480	Pkm	GDLGIEIPAEK	kidney	—	100.0	MRM+PRM	—
P52480	Pkm	GSGTAEVELK	kidney	—	100.0	MRM+PRM	—
P52480	Pkm	GSGTAEVELK	TailSkin	—	100.0	MRM+PRM	—
P52480	Pkm	GVNLPGAAVDLPAVSEK	kidney	—	100.0	MRM+PRM	—
P52480	Pkm	GVNLPGAAVDLPAVSEK	TailSkin	—	100.0	MRM+PRM	—
P53702	Hccs	YVIDYYDGGEVNK	Cerebellum	—	100.0	MRM+PRM	—
P53702	Hccs	YVIDYYDGGEVNK	liver	—	100.0	MRM+PRM	—
P54071	Idh2	LVPGWTKPITIGR	BrainStem	—	100.0	MRM+PRM	—
P54071	Idh2	LVPGWTKPITIGR	Cerebellum	—	100.0	MRM+PRM	—
P54071	Idh2	LVPGWTKPITIGR	Cerebrum	—	100.0	MRM+PRM	—
P54071	Idh2	LVPGWTKPITIGR	kidney	—	100.0	MRM+PRM	—
P54071	Idh2	LVPGWTKPITIGR	liver	—	100.0	MRM+PRM	—
P54071	Idh2	LVPGWTKPITIGR	TailSkin	—	100.0	MRM+PRM	—
P54116	Stom	YLQTLTTIAAEK	BrainStem	—	100.0	MRM+PRM	—
P54116	Stom	YLQTLTTIAAEK	Cerebellum	—	100.0	MRM+PRM	—
P56395	Cyb5a	YYTLEEIQK	BrainStem	—	100.0	MRM+PRM	—
P56395	Cyb5a	YYTLEEIQK	Spleen	—	100.0	MRM+PRM	—
P56395	Cyb5a	YYTLEEIQK	TailSkin	—	100.0	MRM+PRM	—
P57746	Atp6v1d	FTAGDFSTTVIQNVNK	BrainStem	—	100.0	MRM+PRM	—
P57746	Atp6v1d	FTAGDFSTTVIQNVNK	Cerebellum	—	100.0	MRM+PRM	—
P57746	Atp6v1d	FTAGDFSTTVIQNVNK	Cerebrum	—	100.0	MRM+PRM	—
P57746	Atp6v1d	FTAGDFSTTVIQNVNK	kidney	—	100.0	MRM+PRM	—
P57746	Atp6v1d	FTAGDFSTTVIQNVNK	liver	—	100.0	MRM+PRM	—
P57746	Atp6v1d	FTAGDFSTTVIQNVNK	TailSkin	—	100.0	MRM+PRM	—

SysQuan Mouse Database

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