SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
P05063	Aldoc	DNAGAATEEFIK	Cerebellum	54.8	100.0	MRM+PRM	—
P05064	Aldoa	ADDGRPFPQVIK	liver	7.5	100.0	MRM+PRM	—
P05201	Got1	NLDYVATSIHEAVTK	liver	18.9	100.0	MRM+PRM	—
P06745	Gpi	VFEGNRPTNSIVFTK	kidney	2.9	100.0	MRM+PRM	—
P06745	Gpi	VFEGNRPTNSIVFTK	liver	3.9	100.0	MRM+PRM	—
P06802	Enpp1	IPLSPVHK	liver	0.5	100.0	MRM+PRM	—
P07901	Hsp90aa1	FYEQFSK	Cerebellum	50.3	100.0	MRM+PRM	—
P07901	Hsp90aa1	FYEQFSK	Cerebrum	29.7	100.0	MRM+PRM	—
P08003	Pdia4	VEGFPTIYFAPSGDK	BrainStem	0.2	100.0	MRM+PRM	—
P08003	Pdia4	VEGFPTIYFAPSGDK	Cerebellum	0.1	100.0	MRM+PRM	—
P08003	Pdia4	VEGFPTIYFAPSGDK	Heart	0.1	100.0	MRM+PRM	—
P08003	Pdia4	VEGFPTIYFAPSGDK	liver	0.3	100.0	MRM+PRM	—
P08113	Hsp90b1	EEASDYLELDTIK	Heart	0.4	100.0	MRM+PRM	—
P08113	Hsp90b1	EEASDYLELDTIK	kidney	0.8	100.0	MRM+PRM	—
P08113	Hsp90b1	EEASDYLELDTIK	liver	1.5	100.0	MRM+PRM	—
P08249	Mdh2	VAVLGASGGIGQPLSLLLK	Cerebellum	167.3	100.0	MRM+PRM	—
P08249	Mdh2	VAVLGASGGIGQPLSLLLK	Cerebrum	103.9	100.0	MRM+PRM	—
P08249	Mdh2	VAVLGASGGIGQPLSLLLK	liver	55.1	100.0	MRM+PRM	—
P10126	Eef1a1	LPLQDVYK	liver	44.3	100.0	MRM+PRM	—
P11725	Otc	KPEEVDDEVFYSPR	liver	19.3	100.0	MRM+PRM	—
P13707	Gpd1	GVDEGPNGLK	BrainStem	0.8	100.0	MRM+PRM	—
P13707	Gpd1	GVDEGPNGLK	Cerebellum	1.6	100.0	MRM+PRM	—
P14901	Hmox1	YLGDLSGGQVLK	kidney	0.1	100.0	MRM+PRM	—
P16125	Ldhb	FIIPQIVK	Cerebellum	10.4	100.0	MRM+PRM	—
P16125	Ldhb	FIIPQIVK	Cerebrum	7.0	100.0	MRM+PRM	—
P16125	Ldhb	FIIPQIVK	kidney	4.2	100.0	MRM+PRM	—
P16858	Gapdh	VIPELNGK	liver	18.7	100.0	MRM+PRM	—
P17182	Eno1	IEEELGSK	liver	421.7	100.0	MRM+PRM	—
P17710	Hk1	ASGVEGADVVK	BrainStem	6.3	100.0	MRM+PRM	—
P17710	Hk1	ASGVEGADVVK	Cerebellum	6.8	100.0	MRM+PRM	—
P17710	Hk1	ASGVEGADVVK	Cerebrum	5.2	100.0	MRM+PRM	—
P17742	Ppia	FEDENFILK	liver	2.2	100.0	MRM+PRM	—
P17751	Tpi1	VVFEQTK	BrainStem	329.4	100.0	MRM+PRM	—
P17751	Tpi1	VVFEQTK	Cerebrum	251.7	100.0	MRM+PRM	—
P17751	Tpi1	VVFEQTK	Heart	328.3	100.0	MRM+PRM	—
P17751	Tpi1	VVFEQTK	kidney	239.3	100.0	MRM+PRM	—
P19096	Fasn	FDASFFGVHPK	kidney	0.7	100.0	MRM+PRM	—
P19096	Fasn	FDASFFGVHPK	liver	0.6	100.0	MRM+PRM	—
P21550	Eno3	IEEALGDK	Heart	25.9	100.0	MRM+PRM	—
P21550	Eno3	IEEALGDK	liver	0.3	100.0	MRM+PRM	—
P21614	Gc	VLEPTLK	Cerebellum	0.1	100.0	MRM+PRM	—
P21614	Gc	VLEPTLK	kidney	6.0	100.0	MRM+PRM	—
P23492	Pnp	VFGFSLITNK	BrainStem	0.4	100.0	MRM+PRM	—
P23492	Pnp	VFGFSLITNK	Cerebrum	0.2	100.0	MRM+PRM	—
P23492	Pnp	VFGFSLITNK	kidney	0.7	100.0	MRM+PRM	—
P23492	Pnp	VFGFSLITNK	liver	1.8	100.0	MRM+PRM	—
P24369	Ppib	TVDNFVALATGEK	liver	14.5	100.0	MRM+PRM	—
P26040	Ezr	SQEQLAAELAEYTAK	BrainStem	1.1	100.0	MRM+PRM	—
P26040	Ezr	SQEQLAAELAEYTAK	Cerebellum	2.1	100.0	MRM+PRM	—
P26040	Ezr	SQEQLAAELAEYTAK	kidney	34.2	100.0	MRM+PRM	—

SysQuan Mouse Database

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