SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
Q9WTP7	Ak3	GVLETFSGTETNK	liver	—	100.0	MRM+PRM	—
Q9WTP7	Ak3	GVLETFSGTETNK	LymphNodes	—	100.0	MRM+PRM	—
Q9WTP7	Ak3	GVLETFSGTETNK	Pancreas	—	100.0	MRM+PRM	—
Q9WTP7	Ak3	GVLETFSGTETNK	SalivaryGland	—	100.0	MRM+PRM	—
Q9WTP7	Ak3	GVLETFSGTETNK	SmallIntestines	—	100.0	MRM+PRM	—
Q9WTP7	Ak3	GVLETFSGTETNK	Thymus	—	100.0	MRM+PRM	—
Q9WTP7	Ak3	GVLETFSGTETNK	Thyroid	—	100.0	MRM+PRM	—
Q9WTR5	Cdh13	DIQGSLQDIFK	BrainStem	—	100.0	MRM+PRM	—
Q9WTR5	Cdh13	DIQGSLQDIFK	Cerebellum	—	100.0	MRM+PRM	—
Q9WTR5	Cdh13	DIQGSLQDIFK	Cerebrum	—	100.0	MRM+PRM	—
Q9WTR5	Cdh13	DIQGSLQDIFK	liver	—	100.0	MRM+PRM	—
Q9WTR5	Cdh13	DIQGSLQDIFK	LymphNodes	—	100.0	MRM+PRM	—
Q9WTR5	Cdh13	DIQGSLQDIFK	Muscle	—	100.0	MRM+PRM	—
Q9WTR5	Cdh13	DIQGSLQDIFK	plasma	—	100.0	MRM+PRM	—
Q9WTR5	Cdh13	DIQGSLQDIFK	TailSkin	—	100.0	MRM+PRM	—
Q9WTR5	Cdh13	DIQGSLQDIFK	Thyroid	—	100.0	MRM+PRM	—
Q9WU60	Atrn	LTGSSGFVTDGPGNYK	BrainStem	—	100.0	MRM+PRM	—
Q9WU60	Atrn	LTGSSGFVTDGPGNYK	Cerebellum	—	100.0	MRM+PRM	—
Q9WU60	Atrn	LTGSSGFVTDGPGNYK	kidney	—	100.0	MRM+PRM	—
Q9WU60	Atrn	LTGSSGFVTDGPGNYK	liver	—	100.0	MRM+PRM	—
Q9WU60	Atrn	LTGSSGFVTDGPGNYK	lung	—	100.0	MRM+PRM	—
Q9WU78	Pdcd6ip	NIQVSHQEFSK	Cerebellum	—	100.0	MRM+PRM	—
Q9WU78	Pdcd6ip	NIQVSHQEFSK	Heart	—	100.0	MRM+PRM	—
Q9WU78	Pdcd6ip	NIQVSHQEFSK	lung	—	100.0	MRM+PRM	—
Q9WU78	Pdcd6ip	NIQVSHQEFSK	LymphNodes	—	100.0	MRM+PRM	—
Q9WU78	Pdcd6ip	NIQVSHQEFSK	Muscle	—	100.0	MRM+PRM	—
Q9WU78	Pdcd6ip	NIQVSHQEFSK	Pancreas	—	100.0	MRM+PRM	—
Q9WU78	Pdcd6ip	NIQVSHQEFSK	SalivaryGland	—	100.0	MRM+PRM	—
Q9WU78	Pdcd6ip	NIQVSHQEFSK	SmallIntestines	—	100.0	MRM+PRM	—
Q9WU78	Pdcd6ip	NIQVSHQEFSK	Spleen	—	100.0	MRM+PRM	—
Q9WU78	Pdcd6ip	NIQVSHQEFSK	TailSkin	—	100.0	MRM+PRM	—
Q9WU78	Pdcd6ip	NIQVSHQEFSK	Thymus	—	100.0	MRM+PRM	—
Q9WU78	Pdcd6ip	NIQVSHQEFSK	Thyroid	—	100.0	MRM+PRM	—
Q9WUB3	Pygm	APNDFNLK	kidney	—	100.0	MRM+PRM	—
Q9WUB3	Pygm	APNDFNLK	lung	—	100.0	MRM+PRM	—
Q9WUB3	Pygm	TNFDAFPDK	BrainStem	—	100.0	MRM+PRM	—
Q9WUB3	Pygm	TNFDAFPDK	Cerebellum	—	100.0	MRM+PRM	—
Q9WUB3	Pygm	VLYPNDNFFEGK	plasma	—	100.0	MRM+PRM	—
Q9WUM4	Coro1c	NADPILISLK	LymphNodes	—	100.0	MRM+PRM	—
Q9WUM4	Coro1c	NADPILISLK	Spleen	—	100.0	MRM+PRM	—
Q9WUM4	Coro1c	NADPILISLK	TailSkin	—	100.0	MRM+PRM	—
Q9WUM4	Coro1c	NADPILISLK	Thymus	—	100.0	MRM+PRM	—
Q9WUM4	Coro1c	NADPILISLK	Thyroid	—	100.0	MRM+PRM	—
Q9WUR9	Ak4	AVILGPPGSGK	BrainStem	—	100.0	MRM+PRM	—
Q9WUR9	Ak4	AVILGPPGSGK	Cerebellum	—	100.0	MRM+PRM	—
Q9WUR9	Ak4	AVILGPPGSGK	Cerebrum	—	100.0	MRM+PRM	—
Q9WUR9	Ak4	AVILGPPGSGK	lung	—	100.0	MRM+PRM	—
Q9WV32	Arpc1b	NSVSQISVLSGGK	BoneMarrow	—	100.0	MRM+PRM	—
Q9WV32	Arpc1b	NSVSQISVLSGGK	BrainStem	—	100.0	MRM+PRM	—
Q9WV32	Arpc1b	NSVSQISVLSGGK	liver	—	100.0	MRM+PRM	—

SysQuan Mouse Database

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