SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
Q9EQ20	Aldh6a1	VNAGDQPGADLGPLITPQAK	BoneMarrow	—	100.0	MRM+PRM	—
Q9EQ20	Aldh6a1	VNAGDQPGADLGPLITPQAK	BrainStem	—	100.0	MRM+PRM	—
Q9EQ20	Aldh6a1	VNAGDQPGADLGPLITPQAK	Cerebrum	—	100.0	MRM+PRM	—
Q9EQ20	Aldh6a1	VNAGDQPGADLGPLITPQAK	lung	—	100.0	MRM+PRM	—
Q9EQ20	Aldh6a1	VNAGDQPGADLGPLITPQAK	Thymus	—	100.0	MRM+PRM	—
Q9EQH3	Vps35	LLDEAIQAVK	BoneMarrow	—	100.0	MRM+PRM	—
Q9EQH3	Vps35	LLDEAIQAVK	Cerebrum	—	100.0	MRM+PRM	—
Q9EQH3	Vps35	LLDEAIQAVK	lung	—	100.0	MRM+PRM	—
Q9EQH3	Vps35	LLDEAIQAVK	Muscle	—	100.0	MRM+PRM	—
Q9EQH3	Vps35	LLDEAIQAVK	Pancreas	—	100.0	MRM+PRM	—
Q9EQH3	Vps35	LLDEAIQAVK	SalivaryGland	—	100.0	MRM+PRM	—
Q9EQH3	Vps35	LLDEAIQAVK	SmallIntestines	—	100.0	MRM+PRM	—
Q9EQH3	Vps35	LLDEAIQAVK	TailSkin	—	100.0	MRM+PRM	—
Q9EQH3	Vps35	LLDEAIQAVK	Thymus	—	100.0	MRM+PRM	—
Q9EQP2	Ehd4	EYQISAGDFPEVK	BrainStem	—	100.0	MRM+PRM	—
Q9EQP2	Ehd4	EYQISAGDFPEVK	Thymus	—	100.0	MRM+PRM	—
Q9EQU5	Set	LNEQASEEILK	BoneMarrow	—	100.0	MRM+PRM	—
Q9EQU5	Set	LNEQASEEILK	BrainStem	—	100.0	MRM+PRM	—
Q9EQU5	Set	LNEQASEEILK	Cerebellum	—	100.0	MRM+PRM	—
Q9EQU5	Set	LNEQASEEILK	Heart	—	100.0	MRM+PRM	—
Q9EQU5	Set	VEVTEFEDIK	BoneMarrow	—	100.0	MRM+PRM	—
Q9EQU5	Set	VEVTEFEDIK	BrainStem	—	100.0	MRM+PRM	—
Q9EQU5	Set	VEVTEFEDIK	Cerebellum	—	100.0	MRM+PRM	—
Q9EQU5	Set	VEVTEFEDIK	Cerebrum	—	100.0	MRM+PRM	—
Q9EQU5	Set	VEVTEFEDIK	kidney	—	100.0	MRM+PRM	—
Q9EQU5	Set	VEVTEFEDIK	liver	—	100.0	MRM+PRM	—
Q9EQU5	Set	VEVTEFEDIK	LymphNodes	—	100.0	MRM+PRM	—
Q9EQU5	Set	VEVTEFEDIK	Muscle	—	100.0	MRM+PRM	—
Q9EQU5	Set	VEVTEFEDIK	plasma	—	100.0	MRM+PRM	—
Q9EQU5	Set	VEVTEFEDIK	SalivaryGland	—	100.0	MRM+PRM	—
Q9EQU5	Set	VEVTEFEDIK	TailSkin	—	100.0	MRM+PRM	—
Q9EQU5	Set	VEVTEFEDIK	Thyroid	—	100.0	MRM+PRM	—
Q9ERE7	Mesd	DDDIEEGDLPEHK	BrainStem	—	100.0	MRM+PRM	—
Q9ERE7	Mesd	DDDIEEGDLPEHK	Cerebellum	—	100.0	MRM+PRM	—
Q9ERE7	Mesd	DDDIEEGDLPEHK	kidney	—	100.0	MRM+PRM	—
Q9ERE7	Mesd	DDDIEEGDLPEHK	liver	—	100.0	MRM+PRM	—
Q9ERL9	Gucy1a1	DVEDGNANFLGK	Cerebrum	—	100.0	MRM+PRM	—
Q9ERL9	Gucy1a1	DVEDGNANFLGK	lung	—	100.0	MRM+PRM	—
Q9ERR7	Selenof	WNTDSVEEFLSEK	BrainStem	—	100.0	MRM+PRM	—
Q9ERR7	Selenof	WNTDSVEEFLSEK	Cerebellum	—	100.0	MRM+PRM	—
Q9ERR7	Selenof	WNTDSVEEFLSEK	Cerebrum	—	100.0	MRM+PRM	—
Q9ERR7	Selenof	WNTDSVEEFLSEK	Heart	—	100.0	MRM+PRM	—
Q9ERR7	Selenof	WNTDSVEEFLSEK	kidney	—	100.0	MRM+PRM	—
Q9ERR7	Selenof	WNTDSVEEFLSEK	Spleen	—	100.0	MRM+PRM	—
Q9ES46	Parvb	LNVAEVTQSEIGQK	BoneMarrow	—	100.0	MRM+PRM	—
Q9ES46	Parvb	LNVAEVTQSEIGQK	Cerebellum	—	100.0	MRM+PRM	—
Q9ES46	Parvb	LNVAEVTQSEIGQK	Heart	—	100.0	MRM+PRM	—
Q9ES46	Parvb	LNVAEVTQSEIGQK	liver	—	100.0	MRM+PRM	—
Q9ES46	Parvb	LNVAEVTQSEIGQK	Thyroid	—	100.0	MRM+PRM	—
Q9EST5	Anp32b	DLSTIEPLK	TailSkin	—	100.0	MRM+PRM	—

SysQuan Mouse Database

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