SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
P29595	Nedd8	EIEIDIEPTDK	Cerebellum	—	100.0	MRM+PRM	—
P29595	Nedd8	EIEIDIEPTDK	Cerebrum	—	100.0	MRM+PRM	—
P29595	Nedd8	EIEIDIEPTDK	kidney	—	100.0	MRM+PRM	—
P29595	Nedd8	EIEIDIEPTDK	liver	—	100.0	MRM+PRM	—
P29758	Oat	AFYNNVLGEYEEYITK	BrainStem	—	100.0	MRM+PRM	—
P29758	Oat	AFYNNVLGEYEEYITK	Cerebellum	—	100.0	MRM+PRM	—
P29758	Oat	AFYNNVLGEYEEYITK	Cerebrum	—	100.0	MRM+PRM	—
P29758	Oat	AFYNNVLGEYEEYITK	kidney	—	100.0	MRM+PRM	—
P29758	Oat	AFYNNVLGEYEEYITK	liver	—	100.0	MRM+PRM	—
P29758	Oat	AFYNNVLGEYEEYITK	MockWholeBrain	—	100.0	MRM+PRM	—
P29758	Oat	AFYNNVLGEYEEYITK	TailSkin	—	100.0	MRM+PRM	—
P30115	Gsta3	AILNYIASK	kidney	—	100.0	MRM+PRM	—
P30115	Gsta3	AILNYIASK	liver	—	100.0	MRM+PRM	—
P32261	Serpinc1	DDLYVSDAFHK	BrainStem	—	100.0	MRM+PRM	—
P32261	Serpinc1	DDLYVSDAFHK	Cerebrum	—	100.0	MRM+PRM	—
P32261	Serpinc1	DDLYVSDAFHK	TailSkin	—	100.0	MRM+PRM	—
P32261	Serpinc1	FDTISEK	Cerebrum	—	100.0	MRM+PRM	—
P32261	Serpinc1	LQPLDFK	BrainStem	—	100.0	MRM+PRM	—
P32261	Serpinc1	LQPLDFK	Cerebellum	—	100.0	MRM+PRM	—
P32261	Serpinc1	LQPLDFK	Cerebrum	—	100.0	MRM+PRM	—
P32261	Serpinc1	LQPLDFK	liver	—	100.0	MRM+PRM	—
P32261	Serpinc1	LQPLDFK	MockWholeBrain	—	100.0	MRM+PRM	—
P32261	Serpinc1	LQPLDFK	Spleen	—	100.0	MRM+PRM	—
P32261	Serpinc1	LQPLDFK	TailSkin	—	100.0	MRM+PRM	—
P32261	Serpinc1	VAEGTQVLELPFK	kidney	—	100.0	MRM+PRM	—
P32261	Serpinc1	VAEGTQVLELPFK	liver	—	100.0	MRM+PRM	—
P32261	Serpinc1	VAEGTQVLELPFK	Spleen	—	100.0	MRM+PRM	—
P34928	Apoc1	EFGNTLEDK	BrainStem	—	100.0	MRM+PRM	—
P34928	Apoc1	EFGNTLEDK	Cerebellum	—	100.0	MRM+PRM	—
P34928	Apoc1	EFGNTLEDK	kidney	—	100.0	MRM+PRM	—
P35279	Rab6a	LVFLGEQSVGK	BrainStem	—	100.0	MRM+PRM	—
P35279	Rab6a	LVFLGEQSVGK	Cerebellum	—	100.0	MRM+PRM	—
P35279	Rab6a	LVFLGEQSVGK	Cerebrum	—	100.0	MRM+PRM	—
P35279	Rab6a	LVFLGEQSVGK	MockWholeBrain	—	100.0	MRM+PRM	—
P38647	Hspa9	EQQIVIQSSGGLSK	BrainStem	—	100.0	MRM+PRM	—
P38647	Hspa9	EQQIVIQSSGGLSK	Cerebellum	—	100.0	MRM+PRM	—
P38647	Hspa9	EQQIVIQSSGGLSK	Cerebrum	—	100.0	MRM+PRM	—
P38647	Hspa9	EQQIVIQSSGGLSK	kidney	—	100.0	MRM+PRM	—
P38647	Hspa9	EQQIVIQSSGGLSK	liver	—	100.0	MRM+PRM	—
P38647	Hspa9	EQQIVIQSSGGLSK	Spleen	—	100.0	MRM+PRM	—
P40142	Tkt	HQPTAIIAK	BrainStem	—	100.0	MRM+PRM	—
P40142	Tkt	HQPTAIIAK	Cerebellum	—	100.0	MRM+PRM	—
P40142	Tkt	HQPTAIIAK	Cerebrum	—	100.0	MRM+PRM	—
P40142	Tkt	HQPTAIIAK	liver	—	100.0	MRM+PRM	—
P40142	Tkt	HQPTAIIAK	TailSkin	—	100.0	MRM+PRM	—
P40142	Tkt	IIALDGDTK	Cerebellum	—	100.0	MRM+PRM	—
P40142	Tkt	IIALDGDTK	kidney	—	100.0	MRM+PRM	—
P40142	Tkt	IIALDGDTK	TailSkin	—	100.0	MRM+PRM	—
P42208	Septin2	ASIPFSVVGSNQLIEAK	BrainStem	—	100.0	MRM+PRM	—
P42337	Pik3ca	LINLTDILK	BrainStem	—	100.0	MRM+PRM	—

SysQuan Mouse Database

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