SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
Q9D358	Acp1	IELLGSYDPQK	Muscle	—	100.0	MRM+PRM	—
Q9D358	Acp1	IELLGSYDPQK	plasma	—	100.0	MRM+PRM	—
Q9D358	Acp1	IELLGSYDPQK	SmallIntestines	—	100.0	MRM+PRM	—
Q9D358	Acp1	IELLGSYDPQK	TailSkin	—	100.0	MRM+PRM	—
Q9D358	Acp1	IELLGSYDPQK	Thyroid	—	100.0	MRM+PRM	—
Q9D379	Ephx1	IIPLLTDPK	BoneMarrow	—	100.0	MRM+PRM	—
Q9D379	Ephx1	IIPLLTDPK	BrainStem	—	100.0	MRM+PRM	—
Q9D379	Ephx1	IIPLLTDPK	Cerebellum	—	100.0	MRM+PRM	—
Q9D379	Ephx1	IIPLLTDPK	Heart	—	100.0	MRM+PRM	—
Q9D379	Ephx1	IIPLLTDPK	lung	—	100.0	MRM+PRM	—
Q9D379	Ephx1	IIPLLTDPK	LymphNodes	—	100.0	MRM+PRM	—
Q9D379	Ephx1	IIPLLTDPK	Pancreas	—	100.0	MRM+PRM	—
Q9D379	Ephx1	IIPLLTDPK	Thymus	—	100.0	MRM+PRM	—
Q9D3B1	Hacd2	QAGLYSISLPNK	kidney	—	100.0	MRM+PRM	—
Q9D3D9	Atp5f1d	IEANEALVK	BoneMarrow	—	100.0	MRM+PRM	—
Q9D3D9	Atp5f1d	IEANEALVK	LymphNodes	—	100.0	MRM+PRM	—
Q9D3D9	Atp5f1d	IEANEALVK	Muscle	—	100.0	MRM+PRM	—
Q9D3D9	Atp5f1d	IEANEALVK	Pancreas	—	100.0	MRM+PRM	—
Q9D3D9	Atp5f1d	IEANEALVK	SalivaryGland	—	100.0	MRM+PRM	—
Q9D3D9	Atp5f1d	IEANEALVK	Spermatozoa	—	100.0	MRM+PRM	—
Q9D3D9	Atp5f1d	IEANEALVK	Thymus	—	100.0	MRM+PRM	—
Q9D3D9	Atp5f1d	IEANEALVK	Thyroid	—	100.0	MRM+PRM	—
Q9D517	Agpat3	FGVLGSSK	BrainStem	—	100.0	MRM+PRM	—
Q9D517	Agpat3	FGVLGSSK	Cerebellum	—	100.0	MRM+PRM	—
Q9D517	Agpat3	FGVLGSSK	Cerebrum	—	100.0	MRM+PRM	—
Q9D517	Agpat3	FGVLGSSK	Heart	—	100.0	MRM+PRM	—
Q9D517	Agpat3	FGVLGSSK	kidney	—	100.0	MRM+PRM	—
Q9D517	Agpat3	FGVLGSSK	lung	—	100.0	MRM+PRM	—
Q9D517	Agpat3	FGVLGSSK	Spermatozoa	—	100.0	MRM+PRM	—
Q9D6F9	Tubb4a	NSSYFVEWIPNNVK	Cerebellum	—	100.0	MRM+PRM	—
Q9D6F9	Tubb4a	NSSYFVEWIPNNVK	Cerebrum	—	100.0	MRM+PRM	—
Q9D6J6	Ndufv2	DIEEIIDELK	Heart	—	100.0	MRM+PRM	—
Q9D6J6	Ndufv2	DIEEIIDELK	lung	—	100.0	MRM+PRM	—
Q9D6J6	Ndufv2	DIEEIIDELK	Spleen	—	100.0	MRM+PRM	—
Q9D6J6	Ndufv2	DIEEIIDELK	Thymus	—	100.0	MRM+PRM	—
Q9D6P8	Calml3	ADQLTEEQIAEFK	TailSkin	—	100.0	MRM+PRM	—
Q9D7G0	Prps1	IFSGSSHQDLSQK	Cerebellum	—	100.0	MRM+PRM	—
Q9D7G0	Prps1	IFSGSSHQDLSQK	Cerebrum	—	100.0	MRM+PRM	—
Q9D7G0	Prps1	IFSGSSHQDLSQK	kidney	—	100.0	MRM+PRM	—
Q9D7G0	Prps1	IFSGSSHQDLSQK	lung	—	100.0	MRM+PRM	—
Q9D7G0	Prps1	IFSGSSHQDLSQK	LymphNodes	—	100.0	MRM+PRM	—
Q9D7G0	Prps1	IFSGSSHQDLSQK	Muscle	—	100.0	MRM+PRM	—
Q9D7G0	Prps1	IFSGSSHQDLSQK	Pancreas	—	100.0	MRM+PRM	—
Q9D7G0	Prps1	IFSGSSHQDLSQK	SalivaryGland	—	100.0	MRM+PRM	—
Q9D7G0	Prps1	IFSGSSHQDLSQK	SmallIntestines	—	100.0	MRM+PRM	—
Q9D7G0	Prps1	IFSGSSHQDLSQK	Spleen	—	100.0	MRM+PRM	—
Q9D7G0	Prps1	IFSGSSHQDLSQK	Thymus	—	100.0	MRM+PRM	—
Q9D7G0	Prps1	IFSGSSHQDLSQK	Thyroid	—	100.0	MRM+PRM	—
Q9D7J9	Echdc3	VIIISAEGPVFSSGHDLK	BrainStem	—	100.0	MRM+PRM	—
Q9D7J9	Echdc3	VIIISAEGPVFSSGHDLK	Cerebellum	—	100.0	MRM+PRM	—

SysQuan Mouse Database

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