SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
Q66JR8	Ptms	SVEAAAELSAK	SalivaryGland	—	100.0	MRM+PRM	—
Q66JR8	Ptms	SVEAAAELSAK	SmallIntestines	—	100.0	MRM+PRM	—
Q66JR8	Ptms	SVEAAAELSAK	TailSkin	—	100.0	MRM+PRM	—
Q68FD5	Cltc	GQFSTDELVAEVEK	BoneMarrow	—	100.0	MRM+PRM	—
Q68FD5	Cltc	GQFSTDELVAEVEK	Cerebellum	—	100.0	MRM+PRM	—
Q68FD5	Cltc	GQFSTDELVAEVEK	Cerebrum	—	100.0	MRM+PRM	—
Q68FD5	Cltc	GQFSTDELVAEVEK	lung	—	100.0	MRM+PRM	—
Q68FD5	Cltc	GQFSTDELVAEVEK	SalivaryGland	—	100.0	MRM+PRM	—
Q68FD5	Cltc	GQFSTDELVAEVEK	SmallIntestines	—	100.0	MRM+PRM	—
Q68FD5	Cltc	GQFSTDELVAEVEK	Thymus	—	100.0	MRM+PRM	—
Q68FD5	Cltc	VSQPIEGHAASFAQFK	BrainStem	—	100.0	MRM+PRM	—
Q68FD5	Cltc	VSQPIEGHAASFAQFK	Cerebellum	—	100.0	MRM+PRM	—
Q68FD5	Cltc	VSQPIEGHAASFAQFK	Cerebrum	—	100.0	MRM+PRM	—
Q68FD5	Cltc	VSQPIEGHAASFAQFK	Heart	—	100.0	MRM+PRM	—
Q68FD5	Cltc	VSQPIEGHAASFAQFK	kidney	—	100.0	MRM+PRM	—
Q68FD5	Cltc	VSQPIEGHAASFAQFK	lung	—	100.0	MRM+PRM	—
Q68FD5	Cltc	VSQPIEGHAASFAQFK	LymphNodes	—	100.0	MRM+PRM	—
Q68FD5	Cltc	VSQPIEGHAASFAQFK	Muscle	—	100.0	MRM+PRM	—
Q68FD5	Cltc	VSQPIEGHAASFAQFK	Pancreas	—	100.0	MRM+PRM	—
Q68FD5	Cltc	VSQPIEGHAASFAQFK	SalivaryGland	—	100.0	MRM+PRM	—
Q68FD5	Cltc	VSQPIEGHAASFAQFK	Spleen	—	100.0	MRM+PRM	—
Q68FD5	Cltc	VSQPIEGHAASFAQFK	Thymus	—	100.0	MRM+PRM	—
Q68FL4	Ahcyl2	VPEVELK	Heart	—	100.0	MRM+PRM	—
Q68FM4	Ptprm	GFGPPATNQFTTK	Heart	—	100.0	MRM+PRM	—
Q68FM4	Ptprm	GFGPPATNQFTTK	lung	—	100.0	MRM+PRM	—
Q69ZN7	Myof	DFETIGQNK	kidney	—	100.0	MRM+PRM	—
Q69ZN7	Myof	DFETIGQNK	lung	—	100.0	MRM+PRM	—
Q6A0F1	Cct8	LVPGGGATEIELAK	liver	—	100.0	MRM+PRM	—
Q6GR78	App	YLETPGDENEHAHFQK	BrainStem	—	100.0	MRM+PRM	—
Q6GR78	App	YLETPGDENEHAHFQK	Cerebellum	—	100.0	MRM+PRM	—
Q6GR78	App	YLETPGDENEHAHFQK	Cerebrum	—	100.0	MRM+PRM	—
Q6GSS7	Hist2h2aa1	VTIAQGGVLPNIQAVLLPK	liver	—	100.0	MRM+PRM	—
Q6IRU2	Tpm4	AGLNSLEAVK	BrainStem	—	100.0	MRM+PRM	—
Q6IRU2	Tpm4	AGLNSLEAVK	Cerebellum	—	100.0	MRM+PRM	—
Q6IRU2	Tpm4	AGLNSLEAVK	Heart	—	100.0	MRM+PRM	—
Q6IRU2	Tpm4	AGLNSLEAVK	kidney	—	100.0	MRM+PRM	—
Q6IRU2	Tpm4	AGLNSLEAVK	liver	—	100.0	MRM+PRM	—
Q6IRU2	Tpm4	AGLNSLEAVK	plasma	—	100.0	MRM+PRM	—
Q6IRU2	Tpm4	AGLNSLEAVK	SalivaryGland	—	100.0	MRM+PRM	—
Q6IRU2	Tpm4	AGLNSLEAVK	TailSkin	—	100.0	MRM+PRM	—
Q6IRU2	Tpm4	AGLNSLEAVK	Thymus	—	100.0	MRM+PRM	—
Q6IRU2	Tpm4	AGLNSLEAVK	Thyroid	—	100.0	MRM+PRM	—
Q6NSU0	Fam3c	SPFEQHIK	kidney	—	100.0	MRM+PRM	—
Q6NVE8	Wdr44	NLDTGEEIPLSLAEEK	BrainStem	—	100.0	MRM+PRM	—
Q6NVE8	Wdr44	NLDTGEEIPLSLAEEK	Cerebellum	—	100.0	MRM+PRM	—
Q6NVE8	Wdr44	NLDTGEEIPLSLAEEK	Cerebrum	—	100.0	MRM+PRM	—
Q6NVE8	Wdr44	NLDTGEEIPLSLAEEK	Heart	—	100.0	MRM+PRM	—
Q6NVE8	Wdr44	NLDTGEEIPLSLAEEK	liver	—	100.0	MRM+PRM	—
Q6NVE8	Wdr44	NLDTGEEIPLSLAEEK	lung	—	100.0	MRM+PRM	—
Q6NXK9	Man1c1	LLPAFNTPTGIPK	BrainStem	—	100.0	MRM+PRM	—

SysQuan Mouse Database

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