SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
P55288	Cdh11	VTITLTDVNDNPPK	BrainStem	—	100.0	MRM	—
P55288	Cdh11	VTITLTDVNDNPPK	Cerebellum	—	100.0	MRM	—
P55288	Cdh11	VTITLTDVNDNPPK	Cerebrum	—	100.0	MRM	—
P56399	Usp5	IFQNAPTDPTQDFSTQVAK	BrainStem	—	100.0	MRM	—
P56399	Usp5	IFQNAPTDPTQDFSTQVAK	Cerebellum	—	100.0	MRM	—
P56399	Usp5	IFQNAPTDPTQDFSTQVAK	Cerebrum	—	100.0	MRM	—
P56480	Atp5f1b	VVDLLAPYAK	BrainStem	—	100.0	MRM	—
P56480	Atp5f1b	VVDLLAPYAK	Cerebrum	—	100.0	MRM	—
P56480	Atp5f1b	VVDLLAPYAK	MockWholeBrain	—	100.0	MRM	—
P57716	Ncstn	NQVEDLLATLEK	BrainStem	—	100.0	MRM	—
P57716	Ncstn	NQVEDLLATLEK	Cerebellum	—	100.0	MRM	—
P57716	Ncstn	NQVEDLLATLEK	Cerebrum	—	100.0	MRM	—
P57716	Ncstn	NQVEDLLATLEK	MockWholeBrain	—	100.0	MRM	—
P57776	Eef1d	ATNFLAHEK	Cerebellum	—	100.0	MRM	—
P57780	Actn4	DYETATLSDIK	Cerebellum	—	100.0	MRM	—
P57780	Actn4	DYETATLSDIK	Cerebrum	—	100.0	MRM	—
P57780	Actn4	VQQLVPK	BrainStem	—	100.0	MRM	—
P57780	Actn4	VQQLVPK	Cerebellum	—	100.0	MRM	—
P58044	Idi1	NVTLNPDPNEIK	BrainStem	—	100.0	MRM	—
P58044	Idi1	NVTLNPDPNEIK	Cerebellum	—	100.0	MRM	—
P58044	Idi1	NVTLNPDPNEIK	Cerebrum	—	100.0	MRM	—
P58044	Idi1	NVTLNPDPNEIK	MockWholeBrain	—	100.0	MRM	—
P58058	Nadk	DASLLQPFK	MockWholeBrain	—	100.0	MRM	—
P58252	Eef2	YFDPANGK	BrainStem	—	100.0	MRM	—
P58774	Tpm2	TIDDLEDEVYAQK	Cerebellum	—	100.0	MRM	—
P58774	Tpm2	TIDDLEDEVYAQK	Cerebrum	—	100.0	MRM	—
P58774	Tpm2	TIDDLEDEVYAQK	MockWholeBrain	—	100.0	MRM	—
P58802	Tbc1d10a	YLPGYYSEK	Cerebrum	—	100.0	MRM	—
P59325	Eif5	VNILFDFVK	BrainStem	—	100.0	MRM	—
P59325	Eif5	VNILFDFVK	Cerebrum	—	100.0	MRM	—
P59325	Eif5	VNILFDFVK	MockWholeBrain	—	100.0	MRM	—
P60335	Pcbp1	EVGSIIGK	BrainStem	—	100.0	MRM	—
P60335	Pcbp1	EVGSIIGK	Cerebellum	—	100.0	MRM	—
P60335	Pcbp1	IITLTGPTNAIFK	BrainStem	—	100.0	MRM	—
P60335	Pcbp1	IITLTGPTNAIFK	Cerebellum	—	100.0	MRM	—
P60335	Pcbp1	IITLTGPTNAIFK	Cerebrum	—	100.0	MRM	—
P60335	Pcbp1	IITLTGPTNAIFK	MockWholeBrain	—	100.0	MRM	—
P60521	Gabarapl2	VPVIVEK	BrainStem	—	100.0	MRM	—
P60521	Gabarapl2	VPVIVEK	Cerebrum	—	100.0	MRM	—
P60670	Nploc4	ESSSEQYVPDVFYK	Cerebellum	—	100.0	MRM	—
P60843	Eif4a1	DQIYDIFQK	BrainStem	—	100.0	MRM	—
P60843	Eif4a1	ELAQQIQK	Cerebrum	—	100.0	MRM	—
P60843	Eif4a1	GYDVIAQAQSGTGK	Cerebellum	—	100.0	MRM	—
P60843	Eif4a1	GYDVIAQAQSGTGK	Cerebrum	—	100.0	MRM	—
P60867	Rps20	LIDLHSPSEIVK	BrainStem	—	100.0	MRM	—
P60867	Rps20	LIDLHSPSEIVK	Cerebrum	—	100.0	MRM	—
P61089	Ube2n	YFHVVIAGPQDSPFEGGTFK	BrainStem	—	100.0	MRM	—
P61089	Ube2n	YFHVVIAGPQDSPFEGGTFK	Cerebellum	—	100.0	MRM	—
P61089	Ube2n	YFHVVIAGPQDSPFEGGTFK	Cerebrum	—	100.0	MRM	—
P61089	Ube2n	YFHVVIAGPQDSPFEGGTFK	MockWholeBrain	—	100.0	MRM	—

SysQuan Mouse Database

Cart (0)