SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
Q922D8	Mthfd1	YVVVTGITPTPLGEGK	liver	3.3	100.0	MRM+PRM	—
Q99J39	Mlycd	ADLLEAQALK	liver	0.5	100.0	MRM+PRM	—
Q99J77	Nans	ALERPYTSK	liver	0.3	100.0	MRM+PRM	—
Q99JI4	Psmd6	PLENLEEEGLPK	kidney	5.5	100.0	MRM+PRM	—
Q99JI6	Rap1b	LVVLGSGGVGK	kidney	3.5	100.0	MRM+PRM	—
Q99KB8	Hagh	LTTVLTTHHHWDHAGGNEK	kidney	0.6	100.0	MRM+PRM	—
Q99KC8	Vwa5a	IVAELQDK	Heart	0.3	100.0	MRM+PRM	—
Q99KC8	Vwa5a	IVAELQDK	liver	0.4	100.0	MRM+PRM	—
Q99KI0	Aco2	GHLDNISNNLLIGAINIENGK	liver	2.1	100.0	MRM+PRM	—
Q99KI0	Aco2	LNRPLTLSEK	Heart	216.7	100.0	MRM+PRM	—
Q99KI0	Aco2	LNRPLTLSEK	liver	4.8	100.0	MRM+PRM	—
Q99KJ8	Dctn2	LLHEVQELTTEVEK	kidney	0.9	100.0	MRM+PRM	—
Q99KK7	Dpp3	FVPNLPK	Heart	0.4	100.0	MRM+PRM	—
Q99KK7	Dpp3	FVPNLPK	liver	1.8	100.0	MRM+PRM	—
Q99L47	St13	AIDLFTDAIK	liver	1.1	100.0	MRM+PRM	—
Q99LC5	Etfa	SDRPELTGAK	liver	70.2	100.0	MRM+PRM	—
Q99LD8	Ddah2	GGGDLPNSQEALQK	Heart	0.9	100.0	MRM+PRM	—
Q99LD8	Ddah2	GVPESLASGEGAGAGLPALDLAK	Heart	0.6	100.0	MRM+PRM	—
Q99LX0	Park7	ALVILAK	liver	21.6	100.0	MRM+PRM	—
Q99P72	Rtn4	GVIQAIQK	liver	1.3	100.0	MRM+PRM	—
Q99P72	Rtn4	HQAQIDHYLGLANK	liver	0.5	100.0	MRM+PRM	—
Q99PL5	Rrbp1	DALNQATSQVESK	kidney	0.7	100.0	MRM+PRM	—
Q99PL5	Rrbp1	LIEILSEK	liver	0.8	100.0	MRM+PRM	—
Q99PL5	Rrbp1	LLATEQEDAAVAK	liver	0.6	100.0	MRM+PRM	—
Q9CPP6	Ndufa5	YTEQITNEK	liver	0.5	100.0	MRM+PRM	—
Q9CPR4	Rpl17	YSLDPENPTK	kidney	209.9	100.0	MRM+PRM	—
Q9CPR4	Rpl17	YSLDPENPTK	liver	139.1	100.0	MRM+PRM	—
Q9CPX6	Atg3	ALEVAEYLTPVLK	liver	2.2	100.0	MRM+PRM	—
Q9CQ65	Mtap	YVDTPFGKPSDALILGK	liver	0.5	100.0	MRM+PRM	—
Q9CQC9	Sar1b	LVFLGLDNAGK	liver	1.2	100.0	MRM+PRM	—
Q9CQI3	Gmfb	LVQTAELTK	kidney	2.9	100.0	MRM+PRM	—
Q9CQI6	Cotl1	EVVQNFAK	Heart	0.6	100.0	MRM+PRM	—
Q9CQI6	Cotl1	EVVQNFAK	kidney	24.7	100.0	MRM+PRM	—
Q9CQI6	Cotl1	EVVQNFAK	liver	3.1	100.0	MRM+PRM	—
Q9CQS8	Sec61b	FYTEDSPGLK	liver	1.4	100.0	MRM+PRM	—
Q9CQW2	Arl8b	DLPNALDEK	Heart	0.4	100.0	MRM+PRM	—
Q9CQW2	Arl8b	DLPNALDEK	liver	0.4	100.0	MRM+PRM	—
Q9CR68	Uqcrfs1	LSDIPEGK	liver	2.3	100.0	MRM+PRM	—
Q9CR86	Carhsp1	LQAVEVVITHLAPGTK	liver	2.3	100.0	MRM+PRM	—
Q9CVB6	Arpc2	ELQAHGADELLK	liver	0.3	100.0	MRM+PRM	—
Q9CVB6	Arpc2	IIEETLALK	liver	0.2	100.0	MRM+PRM	—
Q9CWK8	Snx2	ALSQLAEVEEK	liver	0.4	100.0	MRM+PRM	—
Q9CWS0	Ddah1	GAEILADTFK	liver	0.3	100.0	MRM+PRM	—
Q9CXW4	Rpl11	VLEQLTGQTPVFSK	kidney	5.4	100.0	MRM+PRM	—
Q9CXW4	Rpl11	VLEQLTGQTPVFSK	liver	3.4	100.0	MRM+PRM	—
Q9CXW4	Rpl11	YDGIILPGK	liver	2.9	100.0	MRM+PRM	—
Q9CXZ1	Ndufs4	LDITTLTGVPEEHIK	kidney	2.2	100.0	MRM+PRM	—
Q9CXZ1	Ndufs4	LDITTLTGVPEEHIK	liver	3.2	100.0	MRM+PRM	—
Q9CY50	Ssr1	FLVGFTNK	kidney	0.9	100.0	MRM+PRM	—
Q9CY50	Ssr1	FLVGFTNK	liver	3.0	100.0	MRM+PRM	—

SysQuan Mouse Database

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