SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
Q3TLY5	Gla	DVIAINQDPLGK	liver	—	100.0	MRM+PRM	—
Q3TNA1	Xylb	FTGNQIAK	kidney	—	100.0	MRM+PRM	—
Q3TNL1	G6pdx	IDHYLGK	Cerebrum	—	100.0	MRM+PRM	—
Q3TNL1	G6pdx	IDHYLGK	lung	—	100.0	MRM+PRM	—
Q3TQY2	Dctn4	ATSISTQLPDDPAK	liver	—	100.0	MRM+PRM	—
Q3TQY2	Dctn4	ATSISTQLPDDPAK	lung	—	100.0	MRM+PRM	—
Q3TR40	Thbs1	AQGYSGLSVK	plasma	—	100.0	MRM+PRM	—
Q3TR40	Thbs1	LVPNPDQK	BoneMarrow	—	100.0	MRM+PRM	—
Q3TR40	Thbs1	LVPNPDQK	lung	—	100.0	MRM+PRM	—
Q3TR40	Thbs1	LVPNPDQK	plasma	—	100.0	MRM+PRM	—
Q3TR40	Thbs1	LVPNPDQK	Spleen	—	100.0	MRM+PRM	—
Q3TRH3	Hspa8	EIAEAYLGK	plasma	—	100.0	MRM+PRM	—
Q3TRH3	Hspa8	EIAEAYLGK	SmallIntestines	—	100.0	MRM+PRM	—
Q3TRH3	Hspa8	GTLDPVEK	liver	—	100.0	MRM+PRM	—
Q3TRH3	Hspa8	GTLDPVEK	plasma	—	100.0	MRM+PRM	—
Q3TRH3	Hspa8	ITITNDK	plasma	—	100.0	MRM+PRM	—
Q3TRH3	Hspa8	LLQDFFNGK	liver	—	100.0	MRM+PRM	—
Q3TRH3	Hspa8	LLQDFFNGK	plasma	—	100.0	MRM+PRM	—
Q3TWF2	Hspa5	IINEPTAAAIAYGLDK	lung	—	100.0	MRM+PRM	—
Q3TWF2	Hspa5	NQLTSNPENTVFDAK	lung	—	100.0	MRM+PRM	—
Q3TWV4	Ap2m1	TFITQQGIK	SmallIntestines	—	100.0	MRM+PRM	—
Q3TXJ4	Sar1a	LVFLGLDNAGK	Cerebrum	—	100.0	MRM+PRM	—
Q3TXJ4	Sar1a	LVFLGLDNAGK	Spleen	—	100.0	MRM+PRM	—
Q3TXJ4	Sar1a	LVFLGLDNAGK	TailSkin	—	100.0	MRM+PRM	—
Q3TXJ4	Sar1a	LVFLGLDNAGK	Thymus	—	100.0	MRM+PRM	—
Q3TXS7	Psmd1	TVGTPIASVPGSTNTGTVPGSEK	BoneMarrow	—	100.0	MRM+PRM	—
Q3TXS7	Psmd1	TVGTPIASVPGSTNTGTVPGSEK	BrainStem	—	100.0	MRM+PRM	—
Q3TXS7	Psmd1	TVGTPIASVPGSTNTGTVPGSEK	Cerebellum	—	100.0	MRM+PRM	—
Q3TXS7	Psmd1	TVGTPIASVPGSTNTGTVPGSEK	Cerebrum	—	100.0	MRM+PRM	—
Q3TXS7	Psmd1	TVGTPIASVPGSTNTGTVPGSEK	kidney	—	100.0	MRM+PRM	—
Q3TXS7	Psmd1	TVGTPIASVPGSTNTGTVPGSEK	liver	—	100.0	MRM+PRM	—
Q3TXS7	Psmd1	TVGTPIASVPGSTNTGTVPGSEK	LymphNodes	—	100.0	MRM+PRM	—
Q3TXS7	Psmd1	TVGTPIASVPGSTNTGTVPGSEK	Muscle	—	100.0	MRM+PRM	—
Q3TXS7	Psmd1	TVGTPIASVPGSTNTGTVPGSEK	Pancreas	—	100.0	MRM+PRM	—
Q3TXS7	Psmd1	TVGTPIASVPGSTNTGTVPGSEK	SalivaryGland	—	100.0	MRM+PRM	—
Q3TXS7	Psmd1	TVGTPIASVPGSTNTGTVPGSEK	SmallIntestines	—	100.0	MRM+PRM	—
Q3TXS7	Psmd1	TVGTPIASVPGSTNTGTVPGSEK	Thymus	—	100.0	MRM+PRM	—
Q3TXS7	Psmd1	TVGTPIASVPGSTNTGTVPGSEK	Thyroid	—	100.0	MRM+PRM	—
Q3U122	Acta2	VAPEEHPTLLTEAPLNPK	Cerebrum	—	100.0	MRM+PRM	—
Q3U1J4	Ddb1	EATADDLIK	BrainStem	—	100.0	MRM+PRM	—
Q3U1J4	Ddb1	EATADDLIK	Cerebrum	—	100.0	MRM+PRM	—
Q3U1J4	Ddb1	EATADDLIK	Heart	—	100.0	MRM+PRM	—
Q3U1J4	Ddb1	EATADDLIK	lung	—	100.0	MRM+PRM	—
Q3U1J4	Ddb1	EATADDLIK	Thymus	—	100.0	MRM+PRM	—
Q3U292	H1f3	ASGPPVSELITK	Cerebellum	—	100.0	MRM+PRM	—
Q3U2G2	Hspa4	AFSDPFVEAEK	BrainStem	—	100.0	MRM+PRM	—
Q3U2G2	Hspa4	AFSDPFVEAEK	Cerebellum	—	100.0	MRM+PRM	—
Q3U2G2	Hspa4	AFSDPFVEAEK	Cerebrum	—	100.0	MRM+PRM	—
Q3U2G2	Hspa4	AFSDPFVEAEK	plasma	—	100.0	MRM+PRM	—
Q3U2G2	Hspa4	AFSDPFVEAEK	TailSkin	—	100.0	MRM+PRM	—

SysQuan Mouse Database

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