SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
A0A087WS16	Col6a3	EELSSLKPILTPSTGAGVGSK	lung	—	100.0	None	—
A0A087WS16	Col6a3	EELSSLKPILTPSTGAGVGSK	Pancreas	—	100.0	None	—
A0A087WS16	Col6a3	EELSSLKPILTPSTGAGVGSK	SalivaryGland	—	100.0	None	—
A0A087WS16	Col6a3	EELSSLKPILTPSTGAGVGSK	SciaticNerve	—	100.0	None	—
A0A087WS16	Col6a3	EELSSLKPILTPSTGAGVGSK	Thyroid	—	100.0	None	—
A0A087WS16	Col6a3	EELSSLKPILTPSTGAGVGSK	Trachea	—	100.0	None	—
A0A087WS16	Col6a3	EVYSFASEPNDVFFK	lung	—	100.0	None	—
A0A087WS16	Col6a3	GGSQVYIGNALEYVLK	lung	—	100.0	None	—
A0A087WS16	Col6a3	GGSQVYIGNALEYVLK	Thymus	—	100.0	None	—
A0A087WS16	Col6a3	GPIGSIGPK	Bladder	—	100.0	None	—
A0A087WS16	Col6a3	GPIGSIGPK	Heart	—	100.0	None	—
A0A087WS16	Col6a3	GPIGSIGPK	lung	—	100.0	None	—
A0A087WS16	Col6a3	GPIGSIGPK	Thyroid	—	100.0	None	—
A0A087WS16	Col6a3	GPIGSIGPK	Trachea	—	100.0	None	—
A0A087WS16	Col6a3	GPSVVLK	Bladder	—	100.0	None	—
A0A087WS16	Col6a3	GPSVVLK	Cerebellum	—	100.0	None	—
A0A087WS16	Col6a3	GPSVVLK	lung	—	100.0	None	—
A0A087WS16	Col6a3	GPSVVLK	SalivaryGland	—	100.0	None	—
A0A087WS16	Col6a3	GPSVVLK	SciaticNerve	—	100.0	None	—
A0A087WS16	Col6a3	GPSVVLK	Thyroid	—	100.0	None	—
A0A087WS16	Col6a3	GPSVVLK	Trachea	—	100.0	None	—
A0A087WS16	Col6a3	HTDQEELVK	Bladder	—	100.0	None	—
A0A087WS16	Col6a3	HTDQEELVK	lung	—	100.0	None	—
A0A087WS16	Col6a3	HTDQEELVK	SalivaryGland	—	100.0	None	—
A0A087WS16	Col6a3	HTDQEELVK	SciaticNerve	—	100.0	None	—
A0A087WS16	Col6a3	HTDQEELVK	Trachea	—	100.0	None	—
A0A087WS16	Col6a3	IEDGVPQHLVLFLGGK	BoneMarrow	—	100.0	None	—
A0A087WS16	Col6a3	IEDGVPQHLVLFLGGK	Cerebellum	—	100.0	None	—
A0A087WS16	Col6a3	IEDGVPQHLVLFLGGK	liver	—	100.0	None	—
A0A087WS16	Col6a3	IEDGVPQHLVLFLGGK	Trachea	—	100.0	None	—
A0A087WS16	Col6a3	IGDLQSQIVSLLK	BoneMarrow	—	100.0	None	—
A0A087WS16	Col6a3	IGDLQSQIVSLLK	BrainStem	—	100.0	None	—
A0A087WS16	Col6a3	IGDLQSQIVSLLK	Cerebellum	—	100.0	None	—
A0A087WS16	Col6a3	IGDLQSQIVSLLK	Cerebrum	—	100.0	None	—
A0A087WS16	Col6a3	IGDLQSQIVSLLK	Heart	—	100.0	None	—
A0A087WS16	Col6a3	IGDLQSQIVSLLK	liver	—	100.0	None	—
A0A087WS16	Col6a3	IGDLQSQIVSLLK	Pancreas	—	100.0	None	—
A0A087WS16	Col6a3	IGDLQSQIVSLLK	Spermatozoa	—	100.0	None	—
A0A087WS16	Col6a3	IGDLQSQIVSLLK	Thymus	—	100.0	None	—
A0A087WS16	Col6a3	IGVVQFSNDVFPEFYLK	BrainStem	—	100.0	None	—
A0A087WS16	Col6a3	IGVVQFSNDVFPEFYLK	Heart	—	100.0	None	—
A0A087WS16	Col6a3	IIEELDVKPDGTR	Cerebellum	—	100.0	None	—
A0A087WS16	Col6a3	IIEELDVKPDGTR	Cerebrum	—	100.0	None	—
A0A087WS16	Col6a3	IIEELDVKPDGTR	liver	—	100.0	None	—
A0A087WS16	Col6a3	IIEELDVKPDGTR	lung	—	100.0	None	—
A0A087WS16	Col6a3	IIEELDVKPDGTR	Pancreas	—	100.0	None	—
A0A087WS16	Col6a3	IIEELDVKPDGTR	Spermatozoa	—	100.0	None	—
A0A087WS16	Col6a3	IIEELDVKPDGTR	Thymus	—	100.0	None	—
A0A087WS16	Col6a3	LLWHYDLESK	lung	—	100.0	None	—
A0A087WS16	Col6a3	LNIGPSK	lung	—	100.0	None	—

SysQuan Mouse Database

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