SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
Q99MR8	Mccc1	IGYPVMIK	Cerebrum	—	94.8	MRM	['Meth']
Q8VDD5	Myh9	ADFCIIHYAGK	MockWholeBrain	—	94.8	MRM	['Cys']
Q99LD8	Ddah2	LSDVTLVPVSCSELEK	Cerebellum	—	94.8	MRM	['Cys']
O88342	Wdr1	LATGSDDNCAAFFEGPPFK	Cerebrum	—	94.8	MRM	['Cys']
P61922	Abat	GVVLGGCGDK	BrainStem	—	94.8	MRM	['Cys']
P11983	Tcp1	IACLDFSLQK	Cerebellum	—	94.7	MRM	['Cys']
E9Q2W9	Actn4	MVSDINNGWQHLEQAEK	Cerebrum	—	94.7	MRM	['Meth']
O70325	Gpx4	ICVNGDDAHPLWK	Cerebrum	—	94.7	MRM	['Cys']
Q9CZN7	Shmt2	ISATSIFFESMPYK	BrainStem	—	94.6	MRM	['Meth']
Q924Y0	Bbox1	EFVDLMNSK	BrainStem	—	94.6	MRM	['Meth']
P05064	Aldoa	ALANSLACQGK	MockWholeBrain	—	94.6	MRM	['Cys']
P61161	Actr2	LCYVGYNIEQEQK	BrainStem	—	94.6	MRM	['Cys']
Q91WT9	Cbs	CIIVMPEK	Cerebellum	—	94.6	MRM	['Meth', 'Cys']
P19096	Fasn	DIMLATGK	Cerebrum	—	94.5	MRM	['Meth']
B2RXS4	Plxnb2	LVECGSLFK	MockWholeBrain	—	94.5	MRM	['Cys']
P17182	Eno1	SCNCLLLK	Cerebellum	—	94.5	MRM	['Cys']
Q8R5C5	Actr1b	ACYLSINPQK	MockWholeBrain	—	94.4	MRM	['Cys']
Q5SWU9	Acaca	FVVMVTPEDLK	Cerebrum	—	94.3	MRM	['Meth']
Q64516	Gk	SSSEIYGLMK	BrainStem	—	94.3	MRM	['Meth']
A0A0A6YY47	Ncam1	FFLCQVAGDAK	Cerebellum	—	94.2	MRM	['Cys']
Q8BVI4	Qdpr	VDAILCVAGGWAGGNAK	MockWholeBrain	—	94.2	MRM	['Cys']
P53994	Rab2a	SCLLLQFTDK	Cerebellum	—	94.1	MRM	['Cys']
Q8C5H8	Nadk2	SSGLNLCTGTGSK	Cerebrum	—	94.1	MRM	['Cys']
Q3UEA1	Acly	VDATADYICK	Cerebellum	—	94.0	MRM	['Cys']
Q3V117	Acly	VDATADYICK	Cerebellum	—	94.0	MRM	['Cys']
Q9D273	Mmab	VVPLVQMGETDANVAK	MockWholeBrain	—	94.0	MRM	['Meth']
P62259	Ywhae	LICCDILDVLDK	Cerebellum	—	93.9	MRM	['Cys']
P28474	Adh5	AGDTVIPLYIPQCGECK	BrainStem	—	93.9	MRM	['Cys']
Q8K0E8	Fgb	TPCTVSCNIPVVSGK	MockWholeBrain	—	93.8	MRM	['Cys']
P61082	Ube2m	LVICPDEGFYK	BrainStem	—	93.7	MRM	['Cys']
Q80XN0	Bdh1	SPYCITK	Cerebellum	—	93.7	MRM	['Cys']
P15327	Bpgm	FCSWVDQK	Cerebellum	—	93.7	MRM	['Cys']
Q9QUI0	Rhoa	LVIVGDGACGK	Cerebellum	—	93.5	MRM	['Cys']
P63028	Tpt1	EIADGLCLEVEGK	Cerebellum	—	93.5	MRM	['Cys']
P61161	Actr2	VVVCDNGTGFVK	Cerebellum	—	93.5	MRM	['Cys']
P28474	Adh5	AGDTVIPLYIPQCGECK	MockWholeBrain	—	93.4	MRM	['Cys']
A0A0R4J083	Acadl	VQPIYGGTNEIMK	MockWholeBrain	—	93.3	MRM	['Meth']
P05063	Aldoc	GILAADESVGSMAK	Cerebrum	—	93.2	MRM	['Meth']
Q91ZA3	Pcca	EIGYPVMIK	Cerebellum	—	93.1	MRM	['Meth']
Q01279	Egfr	NLCYANTINWK	Cerebrum	—	93.1	MRM	['Cys']
P56480	Atp5f1b	FLSQPFQVAEVFTGHMGK	Cerebellum	—	93.1	MRM	['Meth']
Q9D1Q6	Erp44	GTINFLHADCDK	Cerebellum	—	93.0	MRM	['Cys']
P28653	Bgn	VVQCSDLGLK	MockWholeBrain	—	92.9	MRM	['Cys']
P08249	Mdh2	GYLGPEQLPDCLK	Cerebellum	—	92.6	MRM	['Cys']
P15105	Glul	LVLCEVFK	Cerebellum	—	92.6	MRM	['Cys']
A2CG49	Kalrn	AGLECSDIEK	MockWholeBrain	—	92.5	MRM	['Cys']
Q9DBJ1	Pgam1	YADLTEDQLPSCESLK	Cerebellum	—	92.4	MRM	['Cys']
Q99LC5	Etfa	TIYAGNALCTVK	MockWholeBrain	—	92.4	MRM	['Cys']
P05202	Got2	EYLPIGGLAEFCK	MockWholeBrain	—	92.4	MRM	['Cys']
Q8VDD5	Myh9	IIGLDQVAGMSETALPGAFK	Cerebellum	—	92.4	MRM	['Meth']

SysQuan Mouse Database

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