SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
Q9D7G0	Prps1	NCTIVSPDAGGAK	LargeIntestines	—	63.8	MRM	['Cys']
P26039	Tln1	QVAASTAQLLVACK	Heart	—	63.2	MRM	['Cys']
Q8CI94	Pygb	AAPGYHMAK	Bladder	—	62.6	MRM	['Meth']
P50171	Hsd17b8	CNSVLPGFIATPMTQK	AdrenalGland	—	61.6	MRM	['Meth', 'Cys']
Q80SW1	Ahcyl1	QVDVVITCTGNK	Trachea	—	62.4	MRM	['Cys']
Q9D0F9	Pgm1	IDAMHGVVGPYVK	kidney	—	62.1	MRM	['Meth']
Q9R1P1	Psmb3	FGIQAQMVTTDFQK	SmallIntestines	—	62.0	MRM	['Meth']
P00329	Adh1	LVADFMAK	kidney	—	61.0	MRM	['Meth']
P07356	Anxa2	STVHEILCK	Muscle	—	61.1	MRM	['Cys']
P55264	Adk	TGCTFPEKPDFH	Trachea	—	61.5	MRM	['Cys']
Q9D7G0	Prps1	NCTIVSPDAGGAK	Muscle	—	61.0	MRM	['Cys']
Q9DCJ9	Npl	TNQMLEAFEQK	LymphNodes	—	60.8	MRM	['Meth']
Q9DCL9	Paics	ITSCIFQLLQEAGIK	Gallbladder	—	60.9	MRM	['Cys']
P50544	Acadvl	LFVALQGCMDK	Bladder	—	59.3	MRM	['Meth', 'Cys']
P60521	Gabarapl2	TVPQSSLTMGQLYEK	BoneMarrow	—	58.9	MRM	['Meth']
P97807	Fh	SGLGELILPENEPGSSIMPGK	BoneMarrow	—	59.1	MRM	['Meth']
Q9D7G0	Prps1	NCTIVSPDAGGAK	Spleen	—	58.5	MRM	['Cys']
P40124	Cap1	INSITVDNCK	kidney	—	57.9	MRM	['Cys']
Q3UDC8	Eef2	STLTDSLVCK	Muscle	—	58.1	MRM	['Cys']
Q5SWU9	Acaca	EEAISNMVVALK	Cerebellum	—	57.6	MRM	['Meth']
O55222	Ilk	FDMIVPILEK	AdrenalGland	—	56.6	MRM	['Meth']
O55222	Ilk	FDMIVPILEK	LymphNodes	—	57.4	MRM	['Meth']
Q8K021	Scamp1	AQQEFATGVMSNK	kidney	—	57.1	MRM	['Meth']
Q99JY0	Hadhb	AGLTMNDIDAFEFHEAFSGQILANFK	Trachea	—	56.5	MRM	['Meth']
O55222	Ilk	FDMIVPILEK	SmallIntestines	—	56.5	MRM	['Meth']
Q8K0E8	Fgb	MGPTELLIEMEDWK	Pancreas	—	56.4	MRM	['Meth']
Q9DCL9	Paics	VVVLMGSTSDLGHCEK	LargeIntestines	—	55.9	MRM	['Meth', 'Cys']
P08249	Mdh2	GYLGPEQLPDCLK	Heart	—	53.8	MRM	['Cys']
P97807	Fh	SGLGELILPENEPGSSIMPGK	Bladder	—	53.5	MRM	['Meth']
Q91ZA3	Pcca	EIGYPVMIK	Heart	—	53.8	MRM	['Meth']
P24549	Aldh1a1	EEIFGPVQQIMK	Muscle	—	52.8	MRM	['Meth']
Q9D6J6	Ndufv2	QNGWLPISAMNK	Spermatozoa	—	52.8	MRM	['Meth']
Q9R1P3	Psmb2	VAASNIVQMK	Spleen	—	53.4	MRM	['Meth']
P50171	Hsd17b8	CNSVLPGFIATPMTQK	LymphNodes	—	52.4	MRM	['Meth', 'Cys']
P52480	Pkm	CDENILWLDYK	Heart	—	51.7	MRM	['Cys']
Q80SW1	Ahcyl1	LCVPAMNVNDSVTK	Heart	—	52.2	MRM	['Meth', 'Cys']
P14211	Calr	KPEDWDEEMDGEWEPPVIQNPEYK	Spleen	—	51.0	MRM	['Meth']
Q60605	Myl6	CDFTEDQTAEFK	Spleen	—	50.5	MRM	['Cys']
Q9D7G0	Prps1	NCTIVSPDAGGAK	Pancreas	—	50.8	MRM	['Cys']
Q5SWU9	Acaca	EEAISNMVVALK	SalivaryGland	—	50.0	MRM	['Meth']
Q91V41	Rab14	SCLLHQFTEK	liver	—	49.7	MRM	['Cys']
Q91ZA3	Pcca	MADEAVCVGPAPTSK	BoneMarrow	—	50.0	MRM	['Meth', 'Cys']
Q91ZA3	Pcca	MADEAVCVGPAPTSK	LymphNodes	—	48.7	MRM	['Meth', 'Cys']
Q9R1P1	Psmb3	FGIQAQMVTTDFQK	LymphNodes	—	49.3	MRM	['Meth']
Q9DCL9	Paics	ITSCIFQLLQEAGIK	SalivaryGland	—	48.2	MRM	['Cys']
P37804	Tagln	QMEQVAQFLK	Spleen	—	46.9	MRM	['Meth']
P04117	Fabp4	LVSSENFDDYMK	Pancreas	—	45.9	MRM	['Meth']
Q99JY0	Hadhb	AGLTMNDIDAFEFHEAFSGQILANFK	liver	—	46.5	MRM	['Meth']
Q9D7G0	Prps1	NCTIVSPDAGGAK	Cerebrum	—	45.6	MRM	['Cys']
O55222	Ilk	FDMIVPILEK	liver	—	44.8	MRM	['Meth']

SysQuan Mouse Database

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