SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
P40124	Cap1	INSITVDNCK	Thyroid	—	84.6	MRM	['Cys']
P46978	Stt3a	EGSPVLLNCLMYK	Cerebrum	—	84.6	MRM	['Meth', 'Cys']
P57780	Actn4	MVSDINNGWQHLEQAEK	LymphNodes	—	84.9	MRM	['Meth']
P61161	Actr2	ILLTEPPMNPTK	Pancreas	—	84.8	MRM	['Meth']
P62874	Gnb1	LFVSGACDASAK	Bladder	—	84.6	MRM	['Cys']
P62874	Gnb1	LFVSGACDASAK	BrainStem	—	84.8	MRM	['Cys']
P63323	Rps12	LVEALCAEHQINLIK	Spleen	—	84.9	MRM	['Cys']
P97807	Fh	SGLGELILPENEPGSSIMPGK	SalivaryGland	—	84.7	MRM	['Meth']
P97807	Fh	SGLGELILPENEPGSSIMPGK	SciaticNerve	—	84.7	MRM	['Meth']
Q3U1B1	Gnb1	LFVSGACDASAK	BrainStem	—	84.7	MRM	['Cys']
Q64727	Vcl	EILGTCK	BoneMarrow	—	85.4	MRM	['Cys']
Q68FL4	Ahcyl2	LCVPAMNVNDSVTK	LargeIntestines	—	85.2	MRM	['Meth', 'Cys']
Q91VA7	Idh3b	HLNLEYHSSMIADAVK	SciaticNerve	—	84.6	MRM	['Meth']
Q91VA7	Idh3b	HLNLEYHSSMIADAVK	Thymus	—	84.7	MRM	['Meth']
Q91VA7	Idh3b	HLNLEYHSSMIADAVK	Trachea	—	85.3	MRM	['Meth']
Q91VD9	Ndufs1	MCLVEIEK	Heart	—	85.1	MRM	['Meth', 'Cys']
Q91YT0	Ndufv1	EGVDWMNK	Heart	—	85.1	MRM	['Meth']
Q91ZA3	Pcca	MADEAVCVGPAPTSK	Pancreas	—	85.5	MRM	['Meth', 'Cys']
F8WGT1	Ahcyl2	LCVPAMNVNDSVTK	Cerebrum	—	83.6	MRM	['Meth', 'Cys']
O35350	Capn1	LEICNLTPDALK	Gallbladder	—	84.3	MRM	['Cys']
O54890	Itgb3	DAPEGGFDAIMQATVCDEK	Gallbladder	—	83.7	MRM	['Meth', 'Cys']
P17182	Eno1	LMIEMDGTENK	Spermatozoa	—	83.5	MRM	['Meth']
P17182	Eno1	SGETEDTFIADLVVGLCTGQIK	Trachea	—	84.0	MRM	['Cys']
P61161	Actr2	ILLTEPPMNPTK	AdrenalGland	—	83.9	MRM	['Meth']
P61161	Actr2	ILLTEPPMNPTK	LargeIntestines	—	84.2	MRM	['Meth']
Q5SWU9	Acaca	FVVMVTPEDLK	SalivaryGland	—	84.2	MRM	['Meth']
Q64737	Gart	FGDPECQVILPLLK	Pancreas	—	84.3	MRM	['Cys']
Q80SW1	Ahcyl1	QVDVVITCTGNK	lung	—	84.2	MRM	['Cys']
Q8BVI4	Qdpr	AALDGTPGMIGYGMAK	Bladder	—	83.8	MRM	['Meth']
Q8BVI4	Qdpr	VDAILCVAGGWAGGNAK	AdrenalGland	—	84.4	MRM	['Cys']
Q8C5B4	—	HMWPGDIK	Gallbladder	—	83.7	MRM	['Meth']
Q91YT0	Ndufv1	EGVDWMNK	Pancreas	—	83.8	MRM	['Meth']
Q9D7B6	Acad8	FCPPLCTMEK	LargeIntestines	—	84.4	MRM	['Meth', 'Cys']
Q9JLI6	Scly	NFRPGTENTPMIAGLGK	Cerebrum	—	84.2	MRM	['Meth']
Q9R1P4	Psma1	IHQIEYAMEAVK	Thyroid	—	83.8	MRM	['Meth']
P15105	Glul	TCLLNETGDEPFQYK	Trachea	—	82.8	MRM	['Cys']
P15626	Gstm2	CLDAFPNLK	LymphNodes	—	82.8	MRM	['Cys']
P21550	Eno3	SGETEDTFIADLVVGLCTGQIK	BoneMarrow	—	83.5	MRM	['Cys']
P46978	Stt3a	EGSPVLLNCLMYK	Heart	—	82.8	MRM	['Meth', 'Cys']
P47740	Aldh3a2	IVMEAAAK	AdrenalGland	—	83.4	MRM	['Meth']
P54869	Hmgcs2	PTGGAGAVAMLIGPK	Gallbladder	—	83.2	MRM	['Meth']
Q61937	Npm1	DELHIVEAEAMNYEGSPIK	BoneMarrow	—	82.8	MRM	['Meth']
Q68FL4	Ahcyl2	LCVPAMNVNDSVTK	SmallIntestines	—	83.1	MRM	['Meth', 'Cys']
Q80W21	Gstm7	CLDAFPNLK	AdrenalGland	—	82.8	MRM	['Cys']
Q91WG8	Gne	ILLAGCPSYDK	SalivaryGland	—	82.9	MRM	['Cys']
Q9DAU1	Cnpy3	LIEVTETICK	Cerebrum	—	83.2	MRM	['Cys']
Q9R1P4	Psma1	IHQIEYAMEAVK	BoneMarrow	—	82.6	MRM	['Meth']
Q9Z1Q5	Clic1	LHIVQVVCK	AdrenalGland	—	83.0	MRM	['Cys']
Q9Z2I9	Sucla2	CDVIAQGIVMAVK	Bladder	—	83.2	MRM	['Meth', 'Cys']
P07214	Sparc	LHLDYIGPCK	Bladder	—	82.1	MRM	['Cys']

SysQuan Mouse Database

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