SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
P05202	Got2	EYLPIGGLAEFCK	BoneMarrow	—	88.8	MRM	['Cys']
P17182	Eno1	SGETEDTFIADLVVGLCTGQIK	SciaticNerve	—	89.0	MRM	['Cys']
P17182	Eno1	SGETEDTFIADLVVGLCTGQIK	TailSkin	—	89.0	MRM	['Cys']
P50431	Shmt1	VLEACSIACNK	SmallIntestines	—	88.8	MRM	['Cys']
P61161	Actr2	ILLTEPPMNPTK	Bladder	—	89.3	MRM	['Meth']
P62874	Gnb1	LFVSGACDASAK	SalivaryGland	—	89.3	MRM	['Cys']
P62874	Gnb1	LFVSGACDASAK	SciaticNerve	—	89.3	MRM	['Cys']
P97807	Fh	SGLGELILPENEPGSSIMPGK	Spermatozoa	—	88.7	MRM	['Meth']
Q3TSA8	Scamp1	AQQEFATGVMSNK	liver	—	89.2	MRM	['Meth']
Q50HX2	Rab14	SCLLHQFTEK	liver	—	88.9	MRM	['Cys']
Q711T7	Nadsyn1	YDCSSADINPIGGISK	SmallIntestines	—	89.3	MRM	['Cys']
Q8BVI4	Qdpr	AALDGTPGMIGYGMAK	BoneMarrow	—	88.7	MRM	['Meth']
Q8BVI4	Qdpr	VDAILCVAGGWAGGNAK	Pancreas	—	89.3	MRM	['Cys']
Q8JZR0	Acsl5	AEYLGSCLLHK	Muscle	—	89.0	MRM	['Cys']
Q8VDD5	Myh9	IIGLDQVAGMSETALPGAFK	SalivaryGland	—	88.8	MRM	['Meth']
Q8VDD5	Myh9	IIGLDQVAGMSETALPGAFK	SciaticNerve	—	88.8	MRM	['Meth']
Q91V41	Rab14	SCLLHQFTEK	BoneMarrow	—	88.9	MRM	['Cys']
Q91V92	Acly	VDATADYICK	Spleen	—	89.1	MRM	['Cys']
Q91YT0	Ndufv1	EGVDWMNK	Gallbladder	—	89.1	MRM	['Meth']
Q91ZA3	Pcca	VDSGIQPGSDISIYYDPMISK	BoneMarrow	—	89.4	MRM	['Meth']
Q99MQ4	Aspn	VGVNDFCPTVPK	SmallIntestines	—	88.7	MRM	['Cys']
Q9CQA3	Sdhb	CGPMVLDALIK	SalivaryGland	—	88.5	MRM	['Meth', 'Cys']
Q9CQA3	Sdhb	CGPMVLDALIK	SciaticNerve	—	88.5	MRM	['Meth', 'Cys']
Q9D7B6	Acad8	FCPPLCTMEK	Pancreas	—	88.8	MRM	['Meth', 'Cys']
Q9R1P3	Psmb2	VAASNIVQMK	AdrenalGland	—	88.8	MRM	['Meth']
Q9Z1Q5	Clic1	LHIVQVVCK	Bladder	—	88.7	MRM	['Cys']
Q9Z1Q5	Clic1	LHIVQVVCK	SalivaryGland	—	89.2	MRM	['Cys']
Q9Z1Q5	Clic1	LHIVQVVCK	SciaticNerve	—	89.2	MRM	['Cys']
Q9Z1Q5	Clic1	LHIVQVVCK	Trachea	—	89.3	MRM	['Cys']
P09411	Pgk1	VDFNVPMK	Bladder	—	88.1	MRM	['Meth']
P17182	Eno1	SGETEDTFIADLVVGLCTGQIK	Gallbladder	—	87.9	MRM	['Cys']
P17182	Eno1	SGETEDTFIADLVVGLCTGQIK	Spleen	—	88.1	MRM	['Cys']
P24549	Aldh1a1	EEIFGPVQQIMK	Thyroid	—	88.3	MRM	['Meth']
P26039	Tln1	AAMEPIVISAK	kidney	—	87.5	MRM	['Meth']
P46978	Stt3a	EGSPVLLNCLMYK	BoneMarrow	—	88.2	MRM	['Meth', 'Cys']
P46978	Stt3a	EGSPVLLNCLMYK	SalivaryGland	—	87.5	MRM	['Meth', 'Cys']
P47740	Aldh3a2	IVMEAAAK	Trachea	—	88.1	MRM	['Meth']
P61161	Actr2	ILLTEPPMNPTK	Thymus	—	88.5	MRM	['Meth']
P62874	Gnb1	LFVSGACDASAK	LargeIntestines	—	88.5	MRM	['Cys']
P97807	Fh	SGLGELILPENEPGSSIMPGK	AdrenalGland	—	87.5	MRM	['Meth']
Q3UNX5	Acsm3	TATPQNFSNYESMK	Gallbladder	—	88.4	MRM	['Meth']
Q60864	Stip1	LILEQMQK	LymphNodes	—	88.4	MRM	['Meth']
Q61937	Npm1	DELHIVEAEAMNYEGSPIK	AdrenalGland	—	87.6	MRM	['Meth']
Q7TMM9	Tubb2a	EVDEQMLNVQNK	Trachea	—	87.9	MRM	['Meth']
Q8BVI4	Qdpr	AALDGTPGMIGYGMAK	BrainStem	—	87.8	MRM	['Meth']
Q8BVI4	Qdpr	AALDGTPGMIGYGMAK	SalivaryGland	—	87.8	MRM	['Meth']
Q8K0E8	Fgb	HGTDDGVVWMNWK	liver	—	88.3	MRM	['Meth']
Q91V41	Rab14	SCLLHQFTEK	LymphNodes	—	87.9	MRM	['Cys']
Q91WT9	Cbs	CIIVMPEK	BrainStem	—	87.6	MRM	['Meth', 'Cys']
Q922D8	Mthfd1	QGFGNLPICMAK	BrainStem	—	88.3	MRM	['Meth', 'Cys']

SysQuan Mouse Database

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