SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Missed Cleav.	Assays Available	PTM
Q9CQA3	Sdhb	CGPMVLDALIK	Gallbladder	—	91.2	0	MRM	['Meth', 'Cys']
Q9CQA3	Sdhb	CGPMVLDALIK	liver	—	91.2	0	MRM	['Meth', 'Cys']
Q9CZN7	Shmt2	ISATSIFFESMPYK	LymphNodes	—	90.9	0	MRM	['Meth']
Q9CZN7	Shmt2	ISATSIFFESMPYK	Pancreas	—	91.1	0	MRM	['Meth']
Q9D7B6	Acad8	FCPPLCTMEK	liver	—	90.9	0	MRM	['Meth', 'Cys']
Q9DCJ9	Npl	TNQMLEAFEQK	Cerebellum	—	90.9	0	MRM	['Meth']
Q9DCJ9	Npl	TNQMLEAFEQK	Cerebrum	—	90.6	0	MRM	['Meth']
Q9R0P3	Esd	CPALYWLSGLTCTEQNFISK	Gallbladder	—	91.0	0	MRM	['Cys']
P56480	Atp5f1b	TREGNDLYHEMIESGVINLK	liver	—	91.3	1	MRM	['Meth']
P15626	Gstm2	CLDAFPNLK	AdrenalGland	—	90.3	0	MRM	['Cys']
P15626	Gstm2	CLDAFPNLK	SalivaryGland	—	89.8	0	MRM	['Cys']
P17182	Eno1	VNQIGSVTESLQACK	Trachea	—	90.5	0	MRM	['Cys']
P28474	Adh5	AGDTVIPLYIPQCGECK	Thyroid	—	89.7	0	MRM	['Cys']
P40124	Cap1	INSITVDNCK	Gallbladder	—	90.1	0	MRM	['Cys']
P50544	Acadvl	LFVALQGCMDK	AdrenalGland	—	89.8	0	MRM	['Meth', 'Cys']
P50544	Acadvl	LFVALQGCMDK	liver	—	89.9	0	MRM	['Meth', 'Cys']
P61161	Actr2	ILLTEPPMNPTK	LymphNodes	—	90.5	0	MRM	['Meth']
P61922	Abat	GVVLGGCGDK	Gallbladder	—	90.4	0	MRM	['Cys']
P63330	Ppp2ca	ELDQWIEQLNECK	SalivaryGland	—	90.5	0	MRM	['Cys']
P63330	Ppp2ca	ELDQWIEQLNECK	SciaticNerve	—	90.5	0	MRM	['Cys']
Q5SWU9	Acaca	FVVMVTPEDLK	Trachea	—	89.6	0	MRM	['Meth']
Q60790	Rasa3	ALYIQANNCVEAK	Cerebrum	—	90.4	0	MRM	['Cys']
Q80SW1	Ahcyl1	QVDVVITCTGNK	LymphNodes	—	90.1	0	MRM	['Cys']
Q80XN0	Bdh1	GFLVFAGCLMK	SalivaryGland	—	89.9	0	MRM	['Meth', 'Cys']
Q8BMF4	Dlat	YLEKPITMLL	BrainStem	—	89.6	0	MRM	['Meth']
Q8BVI4	Qdpr	AALDGTPGMIGYGMAK	Cerebrum	—	90.3	0	MRM	['Meth']
Q8BVI4	Qdpr	AALDGTPGMIGYGMAK	Gallbladder	—	89.9	0	MRM	['Meth']
Q8BVI4	Qdpr	VDAILCVAGGWAGGNAK	Trachea	—	89.9	0	MRM	['Cys']
Q8K021	Scamp1	AQQEFATGVMSNK	Bladder	—	90.1	0	MRM	['Meth']
Q8R0Y6	Aldh1l1	TAACLAAGNTVVIKPAQVTPLTALK	BrainStem	—	89.9	0	MRM	['Cys']
Q8VDD5	Myh9	IIGLDQVAGMSETALPGAFK	liver	—	90.4	0	MRM	['Meth']
Q91V41	Rab14	SCLLHQFTEK	AdrenalGland	—	90.2	0	MRM	['Cys']
Q91VA7	Idh3b	HLNLEYHSSMIADAVK	AdrenalGland	—	90.2	0	MRM	['Meth']
Q91VA7	Idh3b	HLNLEYHSSMIADAVK	Gallbladder	—	90.2	0	MRM	['Meth']
Q91VA7	Idh3b	HLNLEYHSSMIADAVK	SalivaryGland	—	90.1	0	MRM	['Meth']
Q91VD9	Ndufs1	GNDMQVGTYIEK	BrainStem	—	90.5	0	MRM	['Meth']
Q91VD9	Ndufs1	GNDMQVGTYIEK	kidney	—	90.3	0	MRM	['Meth']
Q91YT0	Ndufv1	EGVDWMNK	LymphNodes	—	90.0	0	MRM	['Meth']
Q99MQ4	Aspn	VGVNDFCPTVPK	Bladder	—	90.4	0	MRM	['Cys']
Q99MQ4	Aspn	VGVNDFCPTVPK	LargeIntestines	—	90.4	0	MRM	['Cys']
Q99MQ4	Aspn	VGVNDFCPTVPK	SalivaryGland	—	89.5	0	MRM	['Cys']
Q99MQ4	Aspn	VGVNDFCPTVPK	SciaticNerve	—	89.5	0	MRM	['Cys']
Q99MR8	Mccc1	IGYPVMIK	kidney	—	90.4	0	MRM	['Meth']
Q99MR8	Mccc1	IGYPVMIK	Thyroid	—	90.4	0	MRM	['Meth']
Q9CZN7	Shmt2	ISATSIFFESMPYK	Spermatozoa	—	89.5	0	MRM	['Meth']
Q9JK38	Gnpnat1	ITLECLPQNVGFYK	Bladder	—	89.6	0	MRM	['Cys']
D3YWR7	Qdpr	AALDGTPGMIGYGMAK	BoneMarrow	—	88.8	0	MRM	['Meth']
D3YWR7	Qdpr	GAVHQLCQSLAGK	BoneMarrow	—	89.1	0	MRM	['Cys']
E9Q1Q9	Khk	FGCQVAGK	lung	—	89.1	0	MRM	['Cys']
O55222	Ilk	FDMIVPILEK	Thymus	—	89.1	0	MRM	['Meth']

SysQuan Mouse Database

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