SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Missed Cleav.	Assays Available	PTM
P37804	Tagln	QMEQVAQFLK	Trachea	—	92.7	0	MRM	['Meth']
P40124	Cap1	INSITVDNCK	AdrenalGland	—	92.9	0	MRM	['Cys']
P46978	Stt3a	EGSPVLLNCLMYK	lung	—	93.0	0	MRM	['Meth', 'Cys']
P46978	Stt3a	EGSPVLLNCLMYK	Spermatozoa	—	93.4	0	MRM	['Meth', 'Cys']
P56480	Atp5f1b	FLSQPFQVAEVFTGHMGK	AdrenalGland	—	92.5	0	MRM	['Meth']
P61161	Actr2	ILLTEPPMNPTK	SmallIntestines	—	92.9	0	MRM	['Meth']
P62874	Gnb1	LFVSGACDASAK	Thymus	—	93.3	0	MRM	['Cys']
P62874	Gnb1	LFVSGACDASAK	Thyroid	—	92.9	0	MRM	['Cys']
P63323	Rps12	LVEALCAEHQINLIK	BrainStem	—	93.5	0	MRM	['Cys']
P97807	Fh	SGLGELILPENEPGSSIMPGK	LymphNodes	—	93.4	0	MRM	['Meth']
P99024	Tubb5	EVDEQMLNVQNK	Bladder	—	93.4	0	MRM	['Meth']
Q07079	Igfbp5	ALSMCPPSPLGCELVK	lung	—	93.0	0	MRM	['Meth', 'Cys']
Q5SWU9	Acaca	FVVMVTPEDLK	LymphNodes	—	92.6	0	MRM	['Meth']
Q60864	Stip1	ALDLDSSCK	Bladder	—	93.3	0	MRM	['Cys']
Q61490	Alcam	TIICHVEGFPK	kidney	—	92.7	0	MRM	['Cys']
Q61937	Npm1	DELHIVEAEAMNYEGSPIK	liver	—	93.5	0	MRM	['Meth']
Q62465	Vat1	CLVLTGFGGYDK	Gallbladder	—	93.0	0	MRM	['Cys']
Q64737	Gart	FGDPECQVILPLLK	Bladder	—	93.3	0	MRM	['Cys']
Q8BVI4	Qdpr	GAVHQLCQSLAGK	Bladder	—	93.2	0	MRM	['Cys']
Q8BVI4	Qdpr	VDAILCVAGGWAGGNAK	Gallbladder	—	93.0	0	MRM	['Cys']
Q8K0E8	Fgb	MGPTELLIEMEDWK	Spermatozoa	—	93.3	0	MRM	['Meth']
Q8VDD5	Myh9	IIGLDQVAGMSETALPGAFK	Spermatozoa	—	92.6	0	MRM	['Meth']
Q91VD9	Ndufs1	GNDMQVGTYIEK	kidney	—	92.7	0	MRM	['Meth']
Q91WK5	Gcsh	SCYEDGWLIK	Pancreas	—	92.6	0	MRM	['Cys']
Q91YT0	Ndufv1	EGVDWMNK	LargeIntestines	—	93.4	0	MRM	['Meth']
Q91YT0	Ndufv1	EGVDWMNK	SalivaryGland	—	93.3	0	MRM	['Meth']
Q91YT0	Ndufv1	YLVVNADEGEPGTCK	BoneMarrow	—	93.1	0	MRM	['Cys']
Q91YT0	Ndufv1	YLVVNADEGEPGTCK	BrainStem	—	92.6	0	MRM	['Cys']
Q91YT0	Ndufv1	YLVVNADEGEPGTCK	Cerebellum	—	92.8	0	MRM	['Cys']
Q922D8	Mthfd1	QGFGNLPICMAK	Thyroid	—	93.3	0	MRM	['Meth', 'Cys']
Q99JY0	Hadhb	AGLTMNDIDAFEFHEAFSGQILANFK	Thyroid	—	93.5	0	MRM	['Meth']
Q9CQA3	Sdhb	CGPMVLDALIK	SmallIntestines	—	92.8	0	MRM	['Meth', 'Cys']
Q9CQA3	Sdhb	CGPMVLDALIK	Spermatozoa	—	93.4	0	MRM	['Meth', 'Cys']
Q9CZN7	Shmt2	ISATSIFFESMPYK	Trachea	—	92.6	0	MRM	['Meth']
Q9DCJ9	Npl	TNQMLEAFEQK	Thymus	—	93.2	0	MRM	['Meth']
Q9R0P3	Esd	CPALYWLSGLTCTEQNFISK	Bladder	—	92.6	0	MRM	['Cys']
Q9R0P3	Esd	CPALYWLSGLTCTEQNFISK	Pancreas	—	92.9	0	MRM	['Cys']
Q9R1P1	Psmb3	FGIQAQMVTTDFQK	Trachea	—	92.7	0	MRM	['Meth']
Q9R1P3	Psmb2	VAASNIVQMK	SmallIntestines	—	93.1	0	MRM	['Meth']
Q9R1P3	Psmb2	VAASNIVQMK	Trachea	—	93.5	0	MRM	['Meth']
Q9WUB3	Pygm	AAPGYHMAK	Thyroid	—	92.7	0	MRM	['Meth']
Q9Z1J3	Nfs1	IPLDVNDMK	Bladder	—	92.7	0	MRM	['Meth']
Q9Z1J3	Nfs1	IPLDVNDMK	Thyroid	—	93.2	0	MRM	['Meth']
Q9Z1J3	Nfs1	IPLDVNDMK	Trachea	—	92.7	0	MRM	['Meth']
Q9Z1Q5	Clic1	LHIVQVVCK	Gallbladder	—	92.5	0	MRM	['Cys']
Q9Z2C5	Mtm1	GENSYGLDITCK	Heart	—	93.3	0	MRM	['Cys']
Q9Z2I9	Sucla2	CDVIAQGIVMAVK	SalivaryGland	—	92.7	0	MRM	['Meth', 'Cys']
P56480	Atp5f1b	TREGNDLYHEMIESGVINLK	Spermatozoa	—	92.9	1	MRM	['Meth']
A0A0R4J083	Acadl	VQPIYGGTNEIMK	Pancreas	—	91.9	0	MRM	['Meth']
A0A668KL51	Idh3b	HLNLEYHSSMIADAVK	SmallIntestines	—	92.4	0	MRM	['Meth']

SysQuan Mouse Database

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