SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
Q91YT0	Ndufv1	YLVVNADEGEPGTCK	Gallbladder	—	95.8	MRM	['Cys']
Q91YT0	Ndufv1	YLVVNADEGEPGTCK	liver	—	96.2	MRM	['Cys']
Q91YT0	Ndufv1	YLVVNADEGEPGTCK	SmallIntestines	—	96.3	MRM	['Cys']
Q91ZA3	Pcca	MADEAVCVGPAPTSK	Muscle	—	95.6	MRM	['Meth', 'Cys']
Q91ZA3	Pcca	MADEAVCVGPAPTSK	Trachea	—	95.5	MRM	['Meth', 'Cys']
Q91ZA3	Pcca	VDSGIQPGSDISIYYDPMISK	Cerebellum	—	95.7	MRM	['Meth']
Q91ZA3	Pcca	VDSGIQPGSDISIYYDPMISK	Gallbladder	—	96.1	MRM	['Meth']
Q99KI0	Aco2	CTTDHISAAGPWLK	SmallIntestines	—	95.8	MRM	['Cys']
Q99KI0	Aco2	CTTDHISAAGPWLK	Spermatozoa	—	95.7	MRM	['Cys']
Q99KI0	Aco2	CTTDHISAAGPWLK	Thyroid	—	96.1	MRM	['Cys']
Q99LB2	Dhrs4	VNCLAPGLIK	Gallbladder	—	96.1	MRM	['Cys']
Q99MQ4	Aspn	VGVNDFCPTVPK	Thyroid	—	95.6	MRM	['Cys']
Q99MR8	Mccc1	IGYPVMIK	Trachea	—	96.5	MRM	['Meth']
Q9CQA3	Sdhb	CGPMVLDALIK	liver	—	96.4	MRM	['Meth', 'Cys']
Q9CWK8	Snx2	MNESDAWFEEK	lung	—	96.4	MRM	['Meth']
Q9D0F9	Pgm1	IDAMHGVVGPYVK	BoneMarrow	—	96.1	MRM	['Meth']
Q9D7B6	Acad8	FCPPLCTMEK	AdrenalGland	—	95.8	MRM	['Meth', 'Cys']
Q9D7B6	Acad8	FCPPLCTMEK	Gallbladder	—	95.9	MRM	['Meth', 'Cys']
Q9DAU1	Cnpy3	LIEVTETICK	liver	—	95.6	MRM	['Cys']
Q9DBJ1	Pgam1	SYDVPPPPMEPDHPFYSNISK	Pancreas	—	96.5	MRM	['Meth']
Q9JII6	Akr1a1	MPLIGLGTWK	BoneMarrow	—	96.5	MRM	['Meth']
Q9JII6	Akr1a1	MPLIGLGTWK	LymphNodes	—	95.5	MRM	['Meth']
Q9JII6	Akr1a1	MPLIGLGTWK	Thyroid	—	95.9	MRM	['Meth']
Q9JK38	Gnpnat1	ITLECLPQNVGFYK	SalivaryGland	—	95.8	MRM	['Cys']
Q9R0P3	Esd	CFGGLQK	AdrenalGland	—	95.8	MRM	['Cys']
Q9R0P3	Esd	CFGGLQK	SmallIntestines	—	96.1	MRM	['Cys']
Q9R0Q7	Ptges3	LTFSCLGGSDNFK	AdrenalGland	—	96.1	MRM	['Cys']
Q9R0Q7	Ptges3	LTFSCLGGSDNFK	LargeIntestines	—	96.2	MRM	['Cys']
Q9R0Q7	Ptges3	LTFSCLGGSDNFK	LymphNodes	—	96.4	MRM	['Cys']
Q9R0Q7	Ptges3	LTFSCLGGSDNFK	SalivaryGland	—	95.8	MRM	['Cys']
Q9R0Q7	Ptges3	LTFSCLGGSDNFK	SciaticNerve	—	95.8	MRM	['Cys']
Q9R1P1	Psmb3	FGIQAQMVTTDFQK	Cerebrum	—	96.3	MRM	['Meth']
Q9R1P1	Psmb3	FGIQAQMVTTDFQK	kidney	—	96.3	MRM	['Meth']
Q9R1P1	Psmb3	FGIQAQMVTTDFQK	SalivaryGland	—	95.6	MRM	['Meth']
Q9R1P1	Psmb3	FGIQAQMVTTDFQK	SciaticNerve	—	95.6	MRM	['Meth']
Q9R1P4	Psma1	IHQIEYAMEAVK	Thymus	—	96.2	MRM	['Meth']
Q9WU19	Hao1	LAMALSGCQNVK	liver	—	95.8	MRM	['Meth', 'Cys']
Q9WUM5	Suclg1	IICQGFTGK	Trachea	—	95.6	MRM	['Cys']
Q9WUM5	Suclg1	MGHAGAIIAGGK	Bladder	—	96.1	MRM	['Meth']
Q9WUM5	Suclg1	MGHAGAIIAGGK	BoneMarrow	—	95.8	MRM	['Meth']
Q9WUM5	Suclg1	MGHAGAIIAGGK	SmallIntestines	—	96.1	MRM	['Meth']
Q9WUM5	Suclg1	MGHAGAIIAGGK	Thyroid	—	95.6	MRM	['Meth']
Q9WV32	Arpc1b	AYHSFLVEPISCHAWNK	Pancreas	—	95.6	MRM	['Cys']
Q9Z1J3	Nfs1	IPLDVNDMK	BrainStem	—	96.3	MRM	['Meth']
Q9Z1J3	Nfs1	IPLDVNDMK	Gallbladder	—	96.0	MRM	['Meth']
Q9Z1Q5	Clic1	LHIVQVVCK	BoneMarrow	—	95.9	MRM	['Cys']
Q9Z1Q5	Clic1	LHIVQVVCK	LargeIntestines	—	96.0	MRM	['Cys']
Q9Z1Q5	Clic1	LHIVQVVCK	Thymus	—	96.2	MRM	['Cys']
Q9Z2I9	Sucla2	CDVIAQGIVMAVK	kidney	—	96.4	MRM	['Meth', 'Cys']
Q9Z2I9	Sucla2	CDVIAQGIVMAVK	SmallIntestines	—	96.5	MRM	['Meth', 'Cys']

SysQuan Mouse Database

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