SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Missed Cleav.	Assays Available	PTM
Q9WUM5	Suclg1	ISALQSAGVVVSMSPAQLGTTIYK	Trachea	—	98.3	0	MRM	['Meth']
Q9WUM5	Suclg1	MGHAGAIIAGGK	AdrenalGland	—	98.1	0	MRM	['Meth']
Q9WUM5	Suclg1	MGHAGAIIAGGK	Gallbladder	—	97.6	0	MRM	['Meth']
Q9WUM5	Suclg1	MGHAGAIIAGGK	liver	—	98.3	0	MRM	['Meth']
Q9WUM5	Suclg1	MGHAGAIIAGGK	Pancreas	—	98.0	0	MRM	['Meth']
Q9WUM5	Suclg1	MGHAGAIIAGGK	SalivaryGland	—	97.9	0	MRM	['Meth']
Q9WUM5	Suclg1	MGHAGAIIAGGK	SciaticNerve	—	97.9	0	MRM	['Meth']
Q9WV32	Arpc1b	AYHSFLVEPISCHAWNK	BoneMarrow	—	97.9	0	MRM	['Cys']
Q9WV32	Arpc1b	AYHSFLVEPISCHAWNK	Cerebrum	—	97.8	0	MRM	['Cys']
Q9WV32	Arpc1b	AYHSFLVEPISCHAWNK	Gallbladder	—	98.0	0	MRM	['Cys']
Q9WV32	Arpc1b	AYHSFLVEPISCHAWNK	Muscle	—	98.0	0	MRM	['Cys']
Q9WV32	Arpc1b	AYHSFLVEPISCHAWNK	SalivaryGland	—	98.1	0	MRM	['Cys']
Q9WV32	Arpc1b	AYHSFLVEPISCHAWNK	Thymus	—	97.9	0	MRM	['Cys']
Q9Z1J3	Nfs1	IPLDVNDMK	kidney	—	97.7	0	MRM	['Meth']
Q9Z1J3	Nfs1	IPLDVNDMK	liver	—	97.9	0	MRM	['Meth']
Q9Z1J3	Nfs1	IPLDVNDMK	Muscle	—	98.1	0	MRM	['Meth']
Q9Z2I9	Sucla2	CDVIAQGIVMAVK	Muscle	—	98.4	0	MRM	['Meth', 'Cys']
P26443	Glud1	RFTMELAK	Cerebrum	—	98.3	1	MRM	['Meth']
P26443	Glud1	RFTMELAK	Gallbladder	—	98.4	1	MRM	['Meth']
P26443	Glud1	RFTMELAK	LymphNodes	—	98.0	1	MRM	['Meth']
P26443	Glud1	RFTMELAK	SmallIntestines	—	98.0	1	MRM	['Meth']
P26443	Glud1	RFTMELAK	Trachea	—	98.4	1	MRM	['Meth']
P56480	Atp5f1b	TREGNDLYHEMIESGVINLK	SalivaryGland	—	97.7	1	MRM	['Meth']
P56480	Atp5f1b	TREGNDLYHEMIESGVINLK	SciaticNerve	—	97.7	1	MRM	['Meth']
A0A0G2JEU1	Aldh2	LGPALATGNVVVMK	BoneMarrow	—	97.2	0	MRM	['Meth']
A0A0G2JEU1	Aldh2	LGPALATGNVVVMK	Pancreas	—	97.0	0	MRM	['Meth']
A0A0G2JEU1	Aldh2	LGPALATGNVVVMK	SalivaryGland	—	97.0	0	MRM	['Meth']
A0A0G2JEU1	Aldh2	LGPALATGNVVVMK	Thymus	—	97.4	0	MRM	['Meth']
A0A0J9YU79	Khk	FGCQVAGK	Gallbladder	—	97.4	0	MRM	['Cys']
A0A0R4J083	Acadl	VQPIYGGTNEIMK	BoneMarrow	—	97.0	0	MRM	['Meth']
A0A5F8MPH8	Tnxb	GFEFSVPFTEMK	Muscle	—	97.5	0	MRM	['Meth']
A1BN54	Actn1	MLDAEDIVGTARPDEK	BoneMarrow	—	97.3	0	MRM	['Meth']
A1BN54	Actn1	MLDAEDIVGTARPDEK	SmallIntestines	—	96.9	0	MRM	['Meth']
D3YWR7	Qdpr	VDAILCVAGGWAGGNAK	lung	—	97.0	0	MRM	['Cys']
O88451	Rdh7	VLAACLTEK	SmallIntestines	—	96.5	0	MRM	['Cys']
P00493	Hprt1	SYCNDQSTGDIK	Bladder	—	96.5	0	MRM	['Cys']
P00493	Hprt1	SYCNDQSTGDIK	SmallIntestines	—	97.5	0	MRM	['Cys']
P00687	Amy1	HMWPGDIK	SalivaryGland	—	97.5	0	MRM	['Meth']
P04117	Fabp4	CDAFVGTWK	Pancreas	—	97.0	0	MRM	['Cys']
P04117	Fabp4	LVSSENFDDYMK	AdrenalGland	—	97.3	0	MRM	['Meth']
P04117	Fabp4	LVSSENFDDYMK	LymphNodes	—	97.1	0	MRM	['Meth']
P04117	Fabp4	LVSSENFDDYMK	Trachea	—	97.2	0	MRM	['Meth']
P05064	Aldoa	ALANSLACQGK	Gallbladder	—	96.9	0	MRM	['Cys']
P05064	Aldoa	ALANSLACQGK	LargeIntestines	—	97.5	0	MRM	['Cys']
P05064	Aldoa	ALANSLACQGK	Trachea	—	97.1	0	MRM	['Cys']
P05202	Got2	EYLPIGGLAEFCK	kidney	—	97.5	0	MRM	['Cys']
P05202	Got2	EYLPIGGLAEFCK	Muscle	—	97.4	0	MRM	['Cys']
P05202	Got2	EYLPIGGLAEFCK	Spermatozoa	—	97.4	0	MRM	['Cys']
P05480	Src	AANILVGENLVCK	BrainStem	—	97.1	0	MRM	['Cys']
P06745	Gpi	FAAYFQQGDMESNGK	Bladder	—	96.6	0	MRM	['Meth']

SysQuan Mouse Database

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