SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
A2AJ15	Man1b1	ADSYYEYLLK	Cerebellum	—	100.0	MRM+PRM	—
A2AJ15	Man1b1	ADSYYEYLLK	Cerebrum	—	100.0	MRM+PRM	—
A2AJ15	Man1b1	ADSYYEYLLK	kidney	—	100.0	MRM+PRM	—
A2AJ15	Man1b1	ADSYYEYLLK	liver	—	100.0	MRM+PRM	—
A2ATU0	Dhtkd1	KPLIVASPK	kidney	—	100.0	MRM+PRM	—
A6H5Y3	Mtr	YSAPVIHVLDASK	BrainStem	—	100.0	MRM+PRM	—
A6H5Y3	Mtr	YSAPVIHVLDASK	Cerebellum	—	100.0	MRM+PRM	—
A6X935	Itih4	FKPTLSQQQK	kidney	—	100.0	MRM+PRM	—
A6ZI44	Aldoa	GILAADESTGSIAK	Cerebellum	—	100.0	MRM+PRM	—
B1ATS5	Atp2a3	VDQSILTGESVSVTK	Cerebellum	—	100.0	MRM+PRM	—
B1AZP2	Dlgap4	ENNLSEEVLGK	Cerebrum	—	100.0	MRM+PRM	—
B2M1R6	Hnrnpk	DLAGSIIGK	BrainStem	—	100.0	MRM+PRM	—
B2M1R6	Hnrnpk	DLAGSIIGK	Cerebellum	—	100.0	MRM+PRM	—
B2M1R6	Hnrnpk	DLAGSIIGK	Cerebrum	—	100.0	MRM+PRM	—
B2M1R6	Hnrnpk	DLAGSIIGK	kidney	—	100.0	MRM+PRM	—
B2RQC6	Cad	ASDPGLPAEEPK	BrainStem	—	100.0	MRM+PRM	—
B2RQC6	Cad	ASDPGLPAEEPK	Cerebrum	—	100.0	MRM+PRM	—
B2RQC6	Cad	ASDPGLPAEEPK	MockWholeBrain	—	100.0	MRM+PRM	—
B2Z893	Pfkfb2	HGESEFNLLGK	liver	—	100.0	MRM+PRM	—
B7FAU9	Flna	GAGTGGLGLAVEGPSEAK	kidney	—	100.0	MRM+PRM	—
B8JJN0	Gm20547	DFHINLFQVLPWLK	kidney	—	100.0	MRM+PRM	—
B8JJN0	Gm20547	GDSGGPLIVHK	kidney	—	100.0	MRM+PRM	—
D3YUD3	Inpp4a	LLANSIHGLNAARPDYIASK	liver	—	100.0	MRM+PRM	—
D3YUL8	Inpp4a	LLANSIHGLNAARPDYIASK	BrainStem	—	100.0	MRM+PRM	—
D3YUL8	Inpp4a	LLANSIHGLNAARPDYIASK	Cerebellum	—	100.0	MRM+PRM	—
D3YUL8	Inpp4a	LLANSIHGLNAARPDYIASK	Cerebrum	—	100.0	MRM+PRM	—
D3YUL8	Inpp4a	LLANSIHGLNAARPDYIASK	MockWholeBrain	—	100.0	MRM+PRM	—
D3YYE1	Anp32a	DLSTIEPLK	kidney	—	100.0	MRM+PRM	—
D3YYK8	Mapre2	LLQASFK	kidney	—	100.0	MRM+PRM	—
E9PUQ8	Dgkd	SIIFDEVDLTDASVAESSTK	BrainStem	—	100.0	MRM+PRM	—
E9PUQ8	Dgkd	SIIFDEVDLTDASVAESSTK	Cerebellum	—	100.0	MRM+PRM	—
E9PUQ8	Dgkd	SIIFDEVDLTDASVAESSTK	Cerebrum	—	100.0	MRM+PRM	—
E9PUQ8	Dgkd	SIIFDEVDLTDASVAESSTK	kidney	—	100.0	MRM+PRM	—
E9PUQ8	Dgkd	SIIFDEVDLTDASVAESSTK	liver	—	100.0	MRM+PRM	—
E9PUQ8	Dgkd	SIIFDEVDLTDASVAESSTK	MockWholeBrain	—	100.0	MRM+PRM	—
E9PV24	Fga	LEVDIDIK	BrainStem	—	100.0	MRM+PRM	—
E9PV24	Fga	LEVDIDIK	kidney	—	100.0	MRM+PRM	—
E9PV24	Fga	LEVDIDIK	liver	—	100.0	MRM+PRM	—
E9PV41	Diaph1	DVQNFPAATDEK	Cerebellum	—	100.0	MRM+PRM	—
E9PV41	Diaph1	DVQNFPAATDEK	Cerebrum	—	100.0	MRM+PRM	—
E9PVD2	Itih4	FKPTLSQQQK	kidney	—	100.0	MRM+PRM	—
E9PVD2	Itih4	FKPTLSQQQK	liver	—	100.0	MRM+PRM	—
E9PVD2	Itih4	VRPQQLVK	kidney	—	100.0	MRM+PRM	—
E9PVD2	Itih4	VRPQQLVK	liver	—	100.0	MRM+PRM	—
E9PWQ3	Col6a3	LLVLITGGK	kidney	—	100.0	MRM+PRM	—
E9PWQ3	Col6a3	LLVLITGGK	Spleen	—	100.0	MRM+PRM	—
E9PWQ3	Col6a3	LLVLITGGK	TailSkin	—	100.0	MRM+PRM	—
E9Q1K3	Add1	TSTSAVPNLFVPLNTNPK	BrainStem	—	100.0	MRM+PRM	—
E9Q1K3	Add1	TSTSAVPNLFVPLNTNPK	Cerebrum	—	100.0	MRM+PRM	—
E9Q3L2	Pi4ka	DFLVIPSPVLVK	BrainStem	—	100.0	MRM+PRM	—

SysQuan Mouse Database

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