SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
A0A024QYR9	Pten	YFSPNFK	MockWholeBrain	—	100.0	MRM	—
A0A087WNU5	Ank3	IIEVHIEK	BrainStem	—	100.0	MRM	—
A0A087WNU5	Ank3	IIEVHIEK	MockWholeBrain	—	100.0	MRM	—
A0A087WR50	Fn1	TYHVGEQWQK	Cerebrum	—	100.0	MRM	—
A0A087WSN6	Fn1	TYHVGEQWQK	Cerebellum	—	100.0	MRM	—
A0A0A6YWG7	Rapgef2	DLTFLHEGNDSK	BrainStem	—	100.0	MRM	—
A0A0A6YWG7	Rapgef2	DLTFLHEGNDSK	Cerebrum	—	100.0	MRM	—
A0A0A6YX18	Atp6v1h	GAVDAAVPTNIIAAK	Cerebellum	—	100.0	MRM	—
A0A0A6YX18	Atp6v1h	LGESVQDLSSFDEYSSELK	BrainStem	—	100.0	MRM	—
A0A0A6YX18	Atp6v1h	YNALLAVQK	BrainStem	—	100.0	MRM	—
A0A0G2JEU1	Aldh2	TEQGPQVDETQFK	Cerebellum	—	100.0	MRM	—
A0A0R4J036	Nefm	EYQDLLNVK	BrainStem	—	100.0	MRM	—
A0A0R4J036	Nefm	EYQDLLNVK	MockWholeBrain	—	100.0	MRM	—
A0A0R4J1E2	Eef1d	VGTDLLEEEITK	BrainStem	—	100.0	MRM	—
A0A0R4J1E2	Eef1d	VGTDLLEEEITK	Cerebellum	—	100.0	MRM	—
A0A0R4J259	Syncrip	DLFEDELVPLFEK	MockWholeBrain	—	100.0	MRM	—
A0A0R4J259	Syncrip	VTEGLTDVILYHQPDDK	BrainStem	—	100.0	MRM	—
A0A0R4J2B2	Kctd12	FNFLEQAFDK	BrainStem	—	100.0	MRM	—
A0A1B0GRV0	Bpnt1	IIQLIEGK	BrainStem	—	100.0	MRM	—
A0A1L1SRX2	Ampd3	YVTGFDSVDDESK	BrainStem	—	100.0	MRM	—
A0A1L1SRX2	Ampd3	YVTGFDSVDDESK	Cerebellum	—	100.0	MRM	—
A0A1L1SRX2	Ampd3	YVTGFDSVDDESK	Cerebrum	—	100.0	MRM	—
A0A1L1SV25	Actn4	DYETATLSDIK	Cerebellum	—	100.0	MRM	—
A0A1L1SV25	Actn4	DYETATLSDIK	Cerebrum	—	100.0	MRM	—
A0A1L1SV25	Actn4	VQQLVPK	BrainStem	—	100.0	MRM	—
A0A1Y7VMN0	Rock2	NLLLLANSTEEQQK	BrainStem	—	100.0	MRM	—
A0A1Y7VMN0	Rock2	NLLLLANSTEEQQK	Cerebrum	—	100.0	MRM	—
A0A286YCT4	Ssr1	FLVGFTNK	BrainStem	—	100.0	MRM	—
A0A286YCT4	Ssr1	FLVGFTNK	Cerebrum	—	100.0	MRM	—
A0A286YCT4	Ssr1	GEDFPANNIVK	BrainStem	—	100.0	MRM	—
A0A286YCT4	Ssr1	GEDFPANNIVK	Cerebellum	—	100.0	MRM	—
A0A2I3BPT1	App	WYFDVTEGK	Cerebrum	—	100.0	MRM	—
A0A2I3BQ48	Dgkh	ISLEFNNK	Cerebellum	—	100.0	MRM	—
A0A2I3BQ48	Dgkh	ISLEFNNK	Cerebrum	—	100.0	MRM	—
A0A2I3BQ48	Dgkh	ISLEFNNK	MockWholeBrain	—	100.0	MRM	—
A0A338P6E5	Dlg4	ANDDLLSEFPDK	Cerebellum	—	100.0	MRM	—
A0A338P6E5	Dlg4	ANDDLLSEFPDK	MockWholeBrain	—	100.0	MRM	—
A0A338P6F7	Robo1	IVEHPSDLIVSK	BrainStem	—	100.0	MRM	—
A0A338P6K2	Myh11	YEILAANAIPK	BrainStem	—	100.0	MRM	—
A0A338P6K2	Myh11	YEILAANAIPK	Cerebrum	—	100.0	MRM	—
A0AA74KSY4	Hdgf	LVIDEPAK	Cerebellum	—	100.0	MRM	—
A0AA74KSY4	Hdgf	LVIDEPAK	Cerebrum	—	100.0	MRM	—
A0AA74KSY4	Hdgf	LVIDEPAK	MockWholeBrain	—	100.0	MRM	—
A0AA74KSY4	Hdgf	YQVFFFGTHETAFLGPK	Cerebellum	—	100.0	MRM	—
A0AA74KSY4	Hdgf	YQVFFFGTHETAFLGPK	Cerebrum	—	100.0	MRM	—
A0AA74KSY4	Hdgf	YQVFFFGTHETAFLGPK	MockWholeBrain	—	100.0	MRM	—
A0JNY3	Gphn	ASHSAVDITK	Cerebrum	—	100.0	MRM	—
A0JNY3	Gphn	VLAQDVYAK	Cerebrum	—	100.0	MRM	—
A1A4T2	Ganab	LVAIVDPHIK	BrainStem	—	100.0	MRM	—
A1A4T2	Ganab	LVAIVDPHIK	Cerebellum	—	100.0	MRM	—

SysQuan Mouse Database

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