SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
A0A068WAQ5	Epb41	LTSTDTIPK	liver	0.2	100.0	MRM+PRM	—
A0A0N4SVB8	Arl8b	DLPNALDEK	Heart	0.6	100.0	MRM+PRM	—
A0AA74KSY4	Hdgf	DLFPYEESK	Cerebellum	2.2	100.0	MRM+PRM	—
A0AA74KSY4	Hdgf	DLFPYEESK	Cerebrum	0.6	100.0	MRM+PRM	—
A0AAQ4VMY7	Dpysl2	GSPLVVISQGK	Cerebellum	58.4	100.0	MRM+PRM	—
A1BN54	Actn1	DYETATLSEIK	Heart	0.1	100.0	MRM+PRM	—
A2ATU0	Dhtkd1	KPLIVASPK	liver	0.2	100.0	MRM+PRM	—
B1ATS5	Atp2a3	VDQSILTGESVSVTK	Cerebellum	6.6	100.0	MRM+PRM	—
B2M1R6	Hnrnpk	DLAGSIIGK	BrainStem	3.9	100.0	MRM+PRM	—
B2M1R6	Hnrnpk	DLAGSIIGK	Cerebellum	10.4	100.0	MRM+PRM	—
B2M1R6	Hnrnpk	DLAGSIIGK	Cerebrum	3.3	100.0	MRM+PRM	—
B2M1R6	Hnrnpk	DLAGSIIGK	kidney	2.1	100.0	MRM+PRM	—
B2M1R6	Hnrnpk	DLAGSIIGK	liver	1.7	100.0	MRM+PRM	—
B2RXM2	Gm6793	EDSVKPGAHLTVK	liver	24.2	100.0	MRM+PRM	—
E9PVD2	Itih4	VRPQQLVK	liver	2.1	100.0	MRM+PRM	—
E9Q1K3	Add1	TSTSAVPNLFVPLNTNPK	BrainStem	3.6	100.0	MRM+PRM	—
E9Q1K3	Add1	TSTSAVPNLFVPLNTNPK	Cerebrum	5.3	100.0	MRM+PRM	—
E9QAI5	Cad	ASDPGLPAEEPK	liver	0.4	100.0	MRM+PRM	—
E9QPE7	Myh11	YEILAANAIPK	liver	0.1	100.0	MRM+PRM	—
F7BJK1	Pcdh1	VTVLDTNDNAPK	Heart	0.0	100.0	MRM+PRM	—
F7BJK1	Pcdh1	VTVLDTNDNAPK	kidney	0.1	100.0	MRM+PRM	—
F8VQJ3	Lamc1	VSVPLIAQGNSYPSETTVK	Cerebellum	1.2	100.0	MRM+PRM	—
F8VQJ3	Lamc1	VSVPLIAQGNSYPSETTVK	kidney	1.7	100.0	MRM+PRM	—
F8WGR0	Add1	TSTSAVPNLFVPLNTNPK	Cerebellum	11.6	100.0	MRM+PRM	—
O08529	Capn2	ALEEAGFK	BrainStem	0.8	100.0	MRM+PRM	—
O08807	Prdx4	LVQAFQYTDK	kidney	0.1	100.0	MRM+PRM	—
O09044	Snap23	ILGLAIESQDAGIK	kidney	0.6	100.0	MRM+PRM	—
O09158	Cyp3a25	DVEINGVFIPK	liver	0.2	100.0	MRM+PRM	—
O35381	Anp32a	DLSTIEPLK	liver	1.4	100.0	MRM+PRM	—
O55106	Strn	SELTDSASVLDNFK	Heart	0.5	100.0	MRM+PRM	—
O55106	Strn	SELTDSASVLDNFK	liver	0.4	100.0	MRM+PRM	—
O70252	Hmox2	AENTQFVK	Heart	0.6	100.0	MRM+PRM	—
O70252	Hmox2	AENTQFVK	liver	0.6	100.0	MRM+PRM	—
O70435	Psma3	DGVVFGVEK	liver	0.3	100.0	MRM+PRM	—
O88451	Rdh7	QVVSHLQDK	liver	3.9	100.0	MRM+PRM	—
O88543	Cops3	VQLSGPQEAEK	BrainStem	1.7	100.0	MRM+PRM	—
O88844	Idh1	ATDFVVPGPGK	BrainStem	4.3	100.0	MRM+PRM	—
O88844	Idh1	ATDFVVPGPGK	Heart	2.3	100.0	MRM+PRM	—
O89053	Coro1a	DAGPLLISLK	BrainStem	2.3	100.0	MRM+PRM	—
O89053	Coro1a	DAGPLLISLK	Cerebellum	3.4	100.0	MRM+PRM	—
O89053	Coro1a	DAGPLLISLK	Cerebrum	5.9	100.0	MRM+PRM	—
O89053	Coro1a	DAGPLLISLK	Heart	0.2	100.0	MRM+PRM	—
O89053	Coro1a	DAGPLLISLK	kidney	0.4	100.0	MRM+PRM	—
O89053	Coro1a	DAGPLLISLK	liver	2.3	100.0	MRM+PRM	—
P00493	Hprt1	VIGGDDLSTLTGK	BrainStem	4.1	100.0	MRM+PRM	—
P00493	Hprt1	VIGGDDLSTLTGK	Cerebrum	2.0	100.0	MRM+PRM	—
P00493	Hprt1	VIGGDDLSTLTGK	kidney	0.9	100.0	MRM+PRM	—
P00493	Hprt1	VIGGDDLSTLTGK	liver	1.1	100.0	MRM+PRM	—
P00688	Amy2a5	LTGLLDLALEK	liver	3.0	100.0	MRM+PRM	—
P03958	Ada	YSPHLLANSK	liver	0.1	100.0	MRM+PRM	—

SysQuan Mouse Database

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