SysQuan Core Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
P11940	PABPC1	EFSPFGTITSAK	liver	—	100.0	MRM	—
P12259	F5	QHQLGVWPLLPGSFK	kidney	—	100.0	MRM	—
P12259	F5	QHQLGVWPLLPGSFK	liver	—	100.0	MRM	—
P12259	F5	QHQLGVWPLLPGSFK	lung	—	100.0	MRM	—
P12259	F5	QHQLGVWPLLPGSFK	plasma	—	100.0	MRM	—
P12259	F5	SQHLDNFSNQIGK	lung	—	100.0	MRM	—
P12268	IMPDH2	FGVPVIADGGIQNVGHIAK	lung	—	100.0	MRM	—
P12694	BCKDHA	VDGNDVFAVYNATK	kidney	—	100.0	MRM	—
P12694	BCKDHA	VDGNDVFAVYNATK	liver	—	100.0	MRM	—
P12814	ACTN1	LLETIDQLYLEYAK	lung	—	100.0	MRM	—
P13497	BMP1	GIFLDTIVPK	liver	—	100.0	MRM	—
P13497	BMP1	GIFLDTIVPK	lung	—	100.0	MRM	—
P13497	BMP1	GIFLDTIVPK	plasma	—	100.0	MRM	—
P13671	C6	ALQEYAAK	liver	—	100.0	MRM	—
P13671	C6	ALQEYAAK	lung	—	100.0	MRM	—
P13674	P4HA1	DPEGFVGHPVNAFK	lung	—	100.0	MRM	—
P13716	ALAD	LAEVALAYAK	liver	—	100.0	MRM	—
P13798	APEH	SFNLSALEK	lung	—	100.0	MRM	—
P13929	ENO3	GNPTVEVDLHTAK	kidney	—	100.0	MRM	—
P13929	ENO3	GNPTVEVDLHTAK	lung	—	100.0	MRM	—
P13929	ENO3	GNPTVEVDLHTAK	plasma	—	100.0	MRM	—
P14868	DARS1	NNAYLAQSPQLYK	lung	—	100.0	MRM	—
P14868	DARS1	NNAYLAQSPQLYK	plasma	—	100.0	MRM	—
P15056	BRAF	LTQEHIEALLDK	kidney	—	100.0	MRM	—
P15056	BRAF	LTQEHIEALLDK	lung	—	100.0	MRM	—
P15121	AKR1B1	SPPGQVTEAVK	lung	—	100.0	MRM	—
P15311	EZR	SQEQLAAELAEYTAK	lung	—	100.0	MRM	—
P15311	EZR	SQEQLAAELAEYTAK	plasma	—	100.0	MRM	—
P15531	NME1	NIIHGSDSVESAEK	liver	—	100.0	MRM	—
P15531	NME1	NIIHGSDSVESAEK	plasma	—	100.0	MRM	—
P15848	ARSB	LLPQLLK	kidney	—	100.0	MRM	—
P15954	COX7C	SHYEEGPGK	kidney	—	100.0	MRM	—
P16035	TIMP2	EVDSGNDIYGNPIK	kidney	—	100.0	MRM	—
P16035	TIMP2	EVDSGNDIYGNPIK	plasma	—	100.0	MRM	—
P16035	TIMP2	EYLIAGK	kidney	—	100.0	MRM	—
P16035	TIMP2	EYLIAGK	lung	—	100.0	MRM	—
P16035	TIMP2	EYLIAGK	plasma	—	100.0	MRM	—
P16118	PFKFB1	VLEDFLK	liver	—	100.0	MRM	—
P16152	CBR1	EYGGLDVLVNNAGIAFK	kidney	—	100.0	MRM	—
P16152	CBR1	EYGGLDVLVNNAGIAFK	lung	—	100.0	MRM	—
P16152	CBR1	EYGGLDVLVNNAGIAFK	plasma	—	100.0	MRM	—
P16615	ATP2A2	IGIFGQDEDVTSK	liver	—	100.0	MRM	—
P16615	ATP2A2	IGIFGQDEDVTSK	plasma	—	100.0	MRM	—
P16615	ATP2A2	NAENAIEALK	liver	—	100.0	MRM	—
P16615	ATP2A2	NAENAIEALK	lung	—	100.0	MRM	—
P16615	ATP2A2	NAENAIEALK	plasma	—	100.0	MRM	—
P16989	YBX3	SVGDGETVEFDVVEGEK	liver	—	100.0	MRM	—
P17174	GOT1	NLDYVATSIHEAVTK	kidney	—	100.0	MRM	—
P17174	GOT1	NLDYVATSIHEAVTK	plasma	—	100.0	MRM	—
P17516	AKR1C4	EDIFYTSK	liver	—	100.0	MRM	—

SysQuan Core Database

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