SysQuan Core Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
P56524	HDAC4	EQQLQQELLALK	liver	—	100.0	None	—
P56524	HDAC4	EQQLQQELLALK	lung	—	100.0	None	—
P56524	HDAC4	TQSAPLPQNAQALQHLVIQQQHQQFLEK	kidney	—	100.0	None	—
P56537	EIF6	ETEEILADVLK	lung	—	100.0	None	—
P56539	CAV3	NINEDIVK	lung	—	100.0	None	—
P56545	CTBP2	IGSGYDNVDIK	liver	—	100.0	None	—
P56559	ARL4C	FAENQGTPLLVIANK	lung	—	100.0	None	—
P56559	ARL4C	FNEFVNTVPTIGFNTEK	lung	—	100.0	None	—
P56589	PEX3	DFAANVYEAFSTPQQLEK	kidney	—	100.0	None	—
P56589	PEX3	LEIWEDLK	lung	—	100.0	None	—
P56715	RP1	EPFKPGNYDIQK	lung	—	100.0	None	—
P56945	BCAR1	FVILSAHK	kidney	—	100.0	None	—
P56962	STX17	DDLVLLK	kidney	—	100.0	None	—
P56962	STX17	DDLVLLK	liver	—	100.0	None	—
P56962	STX17	IDSIADHVNSAAVNVEEGTK	liver	—	100.0	None	—
P56962	STX17	IDSIADHVNSAAVNVEEGTK	lung	—	100.0	None	—
P57058	HUNK	IENLLLDEDNNIK	kidney	—	100.0	None	—
P57060	RWDD2B	LWIYSHHIYNK	kidney	—	100.0	None	—
P57082	TBX4	IENNPFAK	lung	—	100.0	None	—
P57105	SYNJ2BP	ILSVNGQDLK	lung	—	100.0	None	—
P57678	GEMIN4	DVSLTSLAK	lung	—	100.0	None	—
P57729	RAB38	EHGFVGWFETSAK	kidney	—	100.0	None	—
P57729	RAB38	EHGFVGWFETSAK	lung	—	100.0	None	—
P57729	RAB38	LLVIGDLGVGK	lung	—	100.0	None	—
P57735	RAB25	GAVGALLVFDLTK	kidney	—	100.0	None	—
P57735	RAB25	GAVGALLVFDLTK	lung	—	100.0	None	—
P57735	RAB25	VVLIGESGVGK	kidney	—	100.0	None	—
P57737	CORO7	DSHITNLK	liver	—	100.0	None	—
P57737	CORO7	SLQSLLGPSSK	liver	—	100.0	None	—
P57739	CLDN2	TSSYVGASIVTAVGFSK	kidney	—	100.0	None	—
P57740	NUP107	AATLEGWK	lung	—	100.0	None	—
P57740	NUP107	AIYAALSGNLK	kidney	—	100.0	None	—
P57740	NUP107	AYLEAHETFNEWFK	kidney	—	100.0	None	—
P57740	NUP107	AYLEAHETFNEWFK	lung	—	100.0	None	—
P57740	NUP107	DEIGEFSDNIEFYAK	kidney	—	100.0	None	—
P57740	NUP107	EEVSIEVLK	kidney	—	100.0	None	—
P57740	NUP107	GHLDALTADVK	liver	—	100.0	None	—
P57740	NUP107	GHLDALTADVK	lung	—	100.0	None	—
P57740	NUP107	LYLVFSK	kidney	—	100.0	None	—
P57740	NUP107	LYLVFSK	lung	—	100.0	None	—
P57740	NUP107	VLEENQEHYHIVQK	kidney	—	100.0	None	—
P57740	NUP107	VLEENQEHYHIVQK	lung	—	100.0	None	—
P57768	SNX16	QLGLQAFLQNLVAHK	lung	—	100.0	None	—
P57772	EEFSEC	GAPIIPVAAK	lung	—	100.0	None	—
P57772	EEFSEC	IHIPGGLSPESK	lung	—	100.0	None	—
P57772	EEFSEC	LVVVLNK	lung	—	100.0	None	—
P57772	EEFSEC	VNVNVGVLGHIDSGK	liver	—	100.0	None	—
P57772	EEFSEC	VNVNVGVLGHIDSGK	lung	—	100.0	None	—
P58004	SESN2	LYPEGGQLLDEK	kidney	—	100.0	None	—
P58335	ANTXR2	AFDLYFVLDK	lung	—	100.0	None	—

SysQuan Core Database

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