SysQuan Core Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
P55072	VCP	LDQLIYIPLPDEK	kidney	—	100.0	None	—
P55072	VCP	LDQLIYIPLPDEK	lung	—	100.0	None	—
P55072	VCP	LIVDEAINEDNSVVSLSQPK	kidney	—	100.0	None	—
P55072	VCP	LIVDEAINEDNSVVSLSQPK	liver	—	100.0	None	—
P55072	VCP	NAPAIIFIDELDAIAPK	kidney	—	100.0	None	—
P55072	VCP	NAPAIIFIDELDAIAPK	liver	—	100.0	None	—
P55072	VCP	NAPAIIFIDELDAIAPK	plasma	—	100.0	None	—
P55081	MFAP1	DVFERPSAK	liver	—	100.0	None	—
P55081	MFAP1	LKPVFIR	liver	—	100.0	None	—
P55081	MFAP1	LKPVFIR	lung	—	100.0	None	—
P55081	MFAP1	SLAALDALNTDDENDEEEYEAWK	kidney	—	100.0	None	—
P55081	MFAP1	YTHLVDQDTTSFDSAWGQESAQNTK	liver	—	100.0	None	—
P55081	MFAP1	YTHLVDQDTTSFDSAWGQESAQNTK	lung	—	100.0	None	—
P55083	MFAP4	GFYYSLK	liver	—	100.0	None	—
P55083	MFAP4	VDLEDFENNTAYAK	lung	—	100.0	None	—
P55084	HADHB	EAALGAGFSDK	liver	—	100.0	None	—
P55084	HADHB	LKPAFIK	kidney	—	100.0	None	—
P55084	HADHB	LKPAFIK	liver	—	100.0	None	—
P55087	AQP4	GVWTQAFWK	lung	—	100.0	None	—
P55145	MANF	IINEVSKPLAHHIPVEK	dbs	—	100.0	None	—
P55145	MANF	IINEVSKPLAHHIPVEK	kidney	—	100.0	None	—
P55145	MANF	IINEVSKPLAHHIPVEK	liver	—	100.0	None	—
P55145	MANF	IINEVSKPLAHHIPVEK	lung	—	100.0	None	—
P55145	MANF	PLAHHIPVEK	kidney	—	100.0	None	—
P55145	MANF	PLAHHIPVEK	liver	—	100.0	None	—
P55145	MANF	QIDLSTVDLK	liver	—	100.0	None	—
P55157	MTTP	EEILQILK	kidney	—	100.0	None	—
P55157	MTTP	SNLNIFQYIGK	liver	—	100.0	None	—
P55160	NCKAP1L	APLHLHENPDLAK	kidney	—	100.0	None	—
P55160	NCKAP1L	APLHLHENPDLAK	lung	—	100.0	None	—
P55160	NCKAP1L	EFVTPDTDIK	kidney	—	100.0	None	—
P55160	NCKAP1L	EFVTPDTDIK	lung	—	100.0	None	—
P55160	NCKAP1L	LTEEFGPHTK	kidney	—	100.0	None	—
P55160	NCKAP1L	LTEEFGPHTK	lung	—	100.0	None	—
P55196	AFDN	EELSSGDSLSPDPWK	kidney	—	100.0	None	—
P55196	AFDN	EELSSGDSLSPDPWK	lung	—	100.0	None	—
P55196	AFDN	EPEIITVTLK	kidney	—	100.0	None	—
P55196	AFDN	ESSEDSFLSAIINYTNSSTVHFK	liver	—	100.0	None	—
P55196	AFDN	ESSEDSFLSAIINYTNSSTVHFK	lung	—	100.0	None	—
P55196	AFDN	EYFTFPASK	kidney	—	100.0	None	—
P55196	AFDN	GILVFQLK	kidney	—	100.0	None	—
P55196	AFDN	IYADSLKPNIPYK	kidney	—	100.0	None	—
P55196	AFDN	IYADSLKPNIPYK	liver	—	100.0	None	—
P55196	AFDN	IYADSLKPNIPYK	lung	—	100.0	None	—
P55196	AFDN	LAAEVYK	kidney	—	100.0	None	—
P55196	AFDN	LDIDEKPLVVQLNWNK	kidney	—	100.0	None	—
P55196	AFDN	LQLSVTEVGTEK	lung	—	100.0	None	—
P55196	AFDN	QQLGHIEAWAEK	liver	—	100.0	None	—
P55196	AFDN	SSPNVANQPPSPGGK	lung	—	100.0	None	—
P55196	AFDN	TSSVVTLEVAK	lung	—	100.0	None	—

SysQuan Core Database

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