SysQuan Core Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
P43155	CRAT	FNITPEIK	kidney	—	100.0	None	—
P43155	CRAT	LIEGVLDFK	kidney	—	100.0	None	—
P43243	MATR3	DDSFFGETSHNYHK	lung	—	100.0	None	—
P43243	MATR3	IEELDQENEAALENGIK	kidney	—	100.0	None	—
P43243	MATR3	IEELDQENEAALENGIK	liver	—	100.0	None	—
P43243	MATR3	IGPYQPNVPVGIDYVIPK	kidney	—	100.0	None	—
P43243	MATR3	IGPYQPNVPVGIDYVIPK	lung	—	100.0	None	—
P43243	MATR3	ITPENLPQILLQLK	kidney	—	100.0	None	—
P43243	MATR3	VIHLSNLPHSGYSDSAVLK	liver	—	100.0	None	—
P43243	MATR3	VIHLSNLPHSGYSDSAVLK	lung	—	100.0	None	—
P43243	MATR3	YQLLQLVEPFGVISNHLILNK	liver	—	100.0	None	—
P43246	MSH2	ALNLFQGSVEDTTGSQSLAALLNK	liver	—	100.0	None	—
P43246	MSH2	ALNLFQGSVEDTTGSQSLAALLNK	lung	—	100.0	None	—
P43246	MSH2	LVNQWIK	lung	—	100.0	None	—
P43246	MSH2	VGAGDSQLK	kidney	—	100.0	None	—
P43250	GRK6	DLKPENILLDDHGHIR	liver	—	100.0	None	—
P43250	GRK6	DLKPENILLDDHGHIR	lung	—	100.0	None	—
P43250	GRK6	ISDLGLAVHVPEGQTIK	kidney	—	100.0	None	—
P43250	GRK6	ISDLGLAVHVPEGQTIK	lung	—	100.0	None	—
P43304	GPD2	PLVTDPK	liver	—	100.0	None	—
P43304	GPD2	SSYVLSK	lung	—	100.0	None	—
P43304	GPD2	TVGLFLQGGK	kidney	—	100.0	None	—
P43304	GPD2	TVGLFLQGGK	liver	—	100.0	None	—
P43304	GPD2	TVGLFLQGGK	lung	—	100.0	None	—
P43378	PTPN9	LKPHEEPLR	kidney	—	100.0	None	—
P43378	PTPN9	LKPHEEPLR	liver	—	100.0	None	—
P43378	PTPN9	LKPHEEPLR	lung	—	100.0	None	—
P43378	PTPN9	QFLEEINK	liver	—	100.0	None	—
P43378	PTPN9	QFLEEINK	lung	—	100.0	None	—
P43378	PTPN9	WTVQYNVSPLSWNVAVK	kidney	—	100.0	None	—
P43403	ZAP70	TVYHYLISQDK	lung	—	100.0	None	—
P43405	SYK	ISDFGLSK	lung	—	100.0	None	—
P43405	SYK	LIATTAHEK	kidney	—	100.0	None	—
P43405	SYK	LIATTAHEK	liver	—	100.0	None	—
P43405	SYK	LIATTAHEK	lung	—	100.0	None	—
P43405	SYK	LSIPEGK	kidney	—	100.0	None	—
P43405	SYK	NVLLVTQHYAK	kidney	—	100.0	None	—
P43405	SYK	NVLLVTQHYAK	lung	—	100.0	None	—
P43405	SYK	NVLLVTQHYAK	plasma	—	100.0	None	—
P43405	SYK	QTWNLQGQALEQAIISQKPQLEK	dbs	—	100.0	None	—
P43405	SYK	QTWNLQGQALEQAIISQKPQLEK	kidney	—	100.0	None	—
P43405	SYK	QTWNLQGQALEQAIISQKPQLEK	liver	—	100.0	None	—
P43405	SYK	QTWNLQGQALEQAIISQKPQLEK	lung	—	100.0	None	—
P43405	SYK	QTWNLQGQALEQAIISQKPQLEK	plasma	—	100.0	None	—
P43405	SYK	TGPFEDLK	lung	—	100.0	None	—
P43405	SYK	TGPFEDLK	plasma	—	100.0	None	—
P43487	RANBP1	FLNAENAQK	plasma	—	100.0	None	—
P43487	RANBP1	TLEEDEEELFK	lung	—	100.0	None	—
P43487	RANBP1	TLEEDEEELFK	plasma	—	100.0	None	—
P43490	NAMPT	GWNYILEK	kidney	—	100.0	None	—

SysQuan Core Database

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