SysQuan Core Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
P23468	PTPRD	FSQEYESIDPGQQFTWEHSNLEVNKPK	lung	—	100.0	None	—
P23468	PTPRD	HNVADSQITTIGNLVPQK	liver	—	100.0	None	—
P23468	PTPRD	HNVADSQITTIGNLVPQK	lung	—	100.0	None	—
P23468	PTPRD	ILYDDGK	liver	—	100.0	None	—
P23468	PTPRD	LIVNLKPEK	kidney	—	100.0	None	—
P23468	PTPRD	LIVNLKPEK	liver	—	100.0	None	—
P23468	PTPRD	LVSTTGAVPGK	liver	—	100.0	None	—
P23468	PTPRD	LVSTTGAVPGKPR	kidney	—	100.0	None	—
P23468	PTPRD	LVSTTGAVPGKPR	liver	—	100.0	None	—
P23468	PTPRD	LVSTTGAVPGKPR	lung	—	100.0	None	—
P23468	PTPRD	SGEGFIDFIGQVHK	kidney	—	100.0	None	—
P23468	PTPRD	SGEGFIDFIGQVHK	liver	—	100.0	None	—
P23468	PTPRD	TKPAFIGK	kidney	—	100.0	None	—
P23468	PTPRD	TLPVDQVFAK	lung	—	100.0	None	—
P23468	PTPRD	YLLEQLEK	kidney	—	100.0	None	—
P23468	PTPRD	YLLEQLEK	liver	—	100.0	None	—
P23468	PTPRD	YLLEQLEK	lung	—	100.0	None	—
P23469	PTPRE	AEGLLDVFQAVK	kidney	—	100.0	None	—
P23469	PTPRE	AEGLLDVFQAVK	lung	—	100.0	None	—
P23469	PTPRE	VVQDFIDIFSDYANFK	kidney	—	100.0	None	—
P23469	PTPRE	VVQDFIDIFSDYANFK	lung	—	100.0	None	—
P23470	PTPRG	AYIATQGPLK	lung	—	100.0	None	—
P23470	PTPRG	DNSALDPIIHGLK	lung	—	100.0	None	—
P23470	PTPRG	DNSALDPIIHGLK	plasma	—	100.0	None	—
P23470	PTPRG	HSDYINANYVDGYNK	liver	—	100.0	None	—
P23470	PTPRG	HSDYINANYVDGYNK	lung	—	100.0	None	—
P23470	PTPRG	LRPLPGK	kidney	—	100.0	None	—
P23470	PTPRG	LRPLPGK	lung	—	100.0	None	—
P23470	PTPRG	RPVPISYHQLEAFYSIFTTEQQDHVK	kidney	—	100.0	None	—
P23470	PTPRG	SNEFIITQHPLPHTTK	liver	—	100.0	None	—
P23470	PTPRG	STVNVLGFLK	liver	—	100.0	None	—
P23470	PTPRG	STVNVLGFLK	lung	—	100.0	None	—
P23470	PTPRG	TVAILLK	plasma	—	100.0	None	—
P23471	PTPRZ1	FSSFEEAVK	plasma	—	100.0	None	—
P23508	MCC	AQLYLLEK	liver	—	100.0	None	—
P23508	MCC	DYIQQLK	liver	—	100.0	None	—
P23508	MCC	EAQEQAYLVHIEHLK	liver	—	100.0	None	—
P23508	MCC	EAQEQAYLVHIEHLK	lung	—	100.0	None	—
P23508	MCC	GDIVELNK	lung	—	100.0	None	—
P23526	AHCY	LDEAVAEAHLGK	liver	—	100.0	None	—
P23526	AHCY	VAVVAGYGDVGK	kidney	—	100.0	None	—
P23526	AHCY	VAVVAGYGDVGK	liver	—	100.0	None	—
P23526	AHCY	VAVVAGYGDVGK	plasma	—	100.0	None	—
P23526	AHCY	VNIKPQVDR	kidney	—	100.0	None	—
P23526	AHCY	VNIKPQVDR	lung	—	100.0	None	—
P23526	AHCY	VNIKPQVDR	plasma	—	100.0	None	—
P23526	AHCY	YPVGVHFLPK	liver	—	100.0	None	—
P23526	AHCY	YPVGVHFLPK	lung	—	100.0	None	—
P23528	CFL1	ASGVAVSDGVIK	kidney	—	100.0	None	—
P23528	CFL1	ASGVAVSDGVIK	lung	—	100.0	None	—

SysQuan Core Database

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