SysQuan Core Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
P11940	PABPC1	SGVGNIFIK	liver	—	100.0	None	—
P11940	PABPC1	SGVGNIFIK	lung	—	100.0	None	—
P11940	PABPC1	VDEAVAVLQAHQAK	lung	—	100.0	None	—
P11940	PABPC1	YQGVNLYVK	liver	—	100.0	None	—
P12004	PCNA	AEDNADTLALVFEAPNQEK	lung	—	100.0	None	—
P12004	PCNA	FSASGELGNGNIK	liver	—	100.0	None	—
P12004	PCNA	YLNFFTK	lung	—	100.0	None	—
P12074	COX6A1	TKPFPWGDGNHTLFHNPHVNPLPTGYEDE	kidney	—	100.0	None	—
P12074	COX6A1	TKPFPWGDGNHTLFHNPHVNPLPTGYEDE	liver	—	100.0	None	—
P12081	HARS1	IGDYVQQHGGVSLVEQLLQDPK	kidney	—	100.0	None	—
P12081	HARS1	IGDYVQQHGGVSLVEQLLQDPK	lung	—	100.0	None	—
P12081	HARS1	LVSELWDAGIK	plasma	—	100.0	None	—
P12081	HARS1	TTETQVLVASAQK	kidney	—	100.0	None	—
P12081	HARS1	TTETQVLVASAQK	plasma	—	100.0	None	—
P12109	COL6A1	LKPYGALVDK	kidney	—	100.0	None	—
P12109	COL6A1	LKPYGALVDK	liver	—	100.0	None	—
P12109	COL6A1	PYGALVDK	liver	—	100.0	None	—
P12109	COL6A1	YLIVVTDGHPLEGYK	liver	—	100.0	None	—
P12109	COL6A1	YLIVVTDGHPLEGYK	lung	—	100.0	None	—
P12110	COL6A2	GPQGALGEPGK	lung	—	100.0	None	—
P12111	COL6A3	GPIGSIGPK	lung	—	100.0	None	—
P12111	COL6A3	IEEGVPQFLVLISSGK	kidney	—	100.0	None	—
P12111	COL6A3	LLVLITGGK	liver	—	100.0	None	—
P12111	COL6A3	LNIGPSK	liver	—	100.0	None	—
P12111	COL6A3	LNLLDLDYELAEQLDNIAEK	lung	—	100.0	None	—
P12111	COL6A3	NIDSEEVGK	kidney	—	100.0	None	—
P12111	COL6A3	NIDSEEVGK	lung	—	100.0	None	—
P12236	SLC25A6	LLLQVQHASK	plasma	—	100.0	None	—
P12259	F5	PYSLHAHGLSYEK	plasma	—	100.0	None	—
P12259	F5	VNAWQAK	plasma	—	100.0	None	—
P12268	IMPDH2	YFSEADK	kidney	—	100.0	None	—
P12270	TPR	ELENANDLLSATK	liver	—	100.0	None	—
P12270	TPR	ESAEFQTQLEK	lung	—	100.0	None	—
P12270	TPR	FHNELNAHIK	kidney	—	100.0	None	—
P12270	TPR	FHNELNAHIK	lung	—	100.0	None	—
P12270	TPR	GIASTSDPPTANIKPTPVVSTPSK	kidney	—	100.0	None	—
P12270	TPR	GIASTSDPPTANIKPTPVVSTPSK	liver	—	100.0	None	—
P12270	TPR	GIASTSDPPTANIKPTPVVSTPSK	lung	—	100.0	None	—
P12270	TPR	GNEILELK	lung	—	100.0	None	—
P12270	TPR	HVEDLLTK	kidney	—	100.0	None	—
P12270	TPR	IIDIQEK	liver	—	100.0	None	—
P12270	TPR	IIDIQEK	lung	—	100.0	None	—
P12270	TPR	LEHEISHLK	lung	—	100.0	None	—
P12270	TPR	LELDILPLQEANAELSEK	kidney	—	100.0	None	—
P12270	TPR	LELDILPLQEANAELSEK	lung	—	100.0	None	—
P12270	TPR	LLHDQIEK	liver	—	100.0	None	—
P12270	TPR	LLHDQIEK	lung	—	100.0	None	—
P12270	TPR	QLQEIFENYK	kidney	—	100.0	None	—
P12270	TPR	VESEQQYFEIEK	liver	—	100.0	None	—
P12270	TPR	VESEQQYFEIEK	lung	—	100.0	None	—

SysQuan Core Database

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