SysQuan Core Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
O75487	GPC4	ELLENAEK	lung	—	100.0	None	—
O75487	GPC4	YLFAVTGNGLANQGNNPEVQVDTSKPDILILR	liver	—	100.0	None	—
O75489	NDUFS3	DHTNAQFK	kidney	—	100.0	None	—
O75489	NDUFS3	QPPESLK	liver	—	100.0	None	—
O75509	TNFRSF21	LFEIIGVK	kidney	—	100.0	None	—
O75521	ECI2	WDAWNALGSLPK	kidney	—	100.0	None	—
O75525	KHDRBS3	LQEETLTK	lung	—	100.0	None	—
O75528	TADA3	DVDALLK	kidney	—	100.0	None	—
O75528	TADA3	DVDALLK	lung	—	100.0	None	—
O75528	TADA3	VLEAETQILTDWQDK	kidney	—	100.0	None	—
O75528	TADA3	WAQEDLLEEQK	kidney	—	100.0	None	—
O75528	TADA3	WAQEDLLEEQK	lung	—	100.0	None	—
O75530	EED	DPNLLLSVSK	kidney	—	100.0	None	—
O75530	EED	DPNLLLSVSK	liver	—	100.0	None	—
O75530	EED	DPNLLLSVSK	lung	—	100.0	None	—
O75530	EED	HYVGHGNAINELK	lung	—	100.0	None	—
O75530	EED	LYVWDLEVEDPHK	kidney	—	100.0	None	—
O75530	EED	LYVWDLEVEDPHK	lung	—	100.0	None	—
O75530	EED	TNRPFISQK	kidney	—	100.0	None	—
O75530	EED	WLGDLILSK	kidney	—	100.0	None	—
O75530	EED	WLGDLILSK	lung	—	100.0	None	—
O75531	BANF1	AYVVLGQFLVLK	lung	—	100.0	None	—
O75533	SF3B1	AFAVVASALGIPSLLPFLK	lung	—	100.0	None	—
O75533	SF3B1	ATVNTFGYIAK	liver	—	100.0	None	—
O75533	SF3B1	FAGYVTSIAATELEDDDDDYSSSTSLLGQK	liver	—	100.0	None	—
O75533	SF3B1	GSETPGATPGSK	liver	—	100.0	None	—
O75533	SF3B1	KPGYHAPVALLNDIPQSTEQYDPFAEHRPPK	liver	—	100.0	None	—
O75533	SF3B1	KPGYHAPVALLNDIPQSTEQYDPFAEHRPPK	lung	—	100.0	None	—
O75533	SF3B1	LDDLVRPYVHK	kidney	—	100.0	None	—
O75533	SF3B1	LDPFADGGK	kidney	—	100.0	None	—
O75533	SF3B1	LDPFADGGK	liver	—	100.0	None	—
O75533	SF3B1	SLVEIIEHGLVDEQQK	kidney	—	100.0	None	—
O75533	SF3B1	SLVEIIEHGLVDEQQK	liver	—	100.0	None	—
O75533	SF3B1	SLVEIIEHGLVDEQQK	lung	—	100.0	None	—
O75533	SF3B1	SVNDQPSGNLPFLKPDDIQYFDK	kidney	—	100.0	None	—
O75533	SF3B1	SVNDQPSGNLPFLKPDDIQYFDK	liver	—	100.0	None	—
O75533	SF3B1	SVNDQPSGNLPFLKPDDIQYFDK	lung	—	100.0	None	—
O75533	SF3B1	TEILPPFFK	kidney	—	100.0	None	—
O75533	SF3B1	VPELNVQNGVLK	lung	—	100.0	None	—
O75533	SF3B1	VVNGAAASQPPSK	kidney	—	100.0	None	—
O75533	SF3B1	VVNGAAASQPPSK	liver	—	100.0	None	—
O75534	CSDE1	DGFGFIK	kidney	—	100.0	None	—
O75534	CSDE1	DGFGFIK	liver	—	100.0	None	—
O75534	CSDE1	DGFGFIK	lung	—	100.0	None	—
O75534	CSDE1	DNFGFIETANHDK	lung	—	100.0	None	—
O75534	CSDE1	DQFGFINYEVGDSK	lung	—	100.0	None	—
O75534	CSDE1	ELPFGDK	kidney	—	100.0	None	—
O75534	CSDE1	FLGTVEK	lung	—	100.0	None	—
O75534	CSDE1	GDLETLQPGDDVEFTIK	kidney	—	100.0	None	—
O75534	CSDE1	LLGYVATLK	lung	—	100.0	None	—

SysQuan Core Database

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