SysQuan Core Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
Q05932	FPGS	LNIIHVTGTK	liver	—	100.0	MRM	—
Q06033	ITIH3	ESPGNVQIVNGYFVHFFAPQGLPVVPK	kidney	—	100.0	MRM	—
Q06033	ITIH3	EVSFDVELPK	liver	—	100.0	MRM	—
Q06033	ITIH3	FTVSVNVAAGSK	plasma	—	100.0	MRM	—
Q06124	PTPN11	GVDGSFLARPSK	kidney	—	100.0	MRM	—
Q06136	KDSR	PLALPGAHVVVTGGSSGIGK	kidney	—	100.0	MRM	—
Q06136	KDSR	PLALPGAHVVVTGGSSGIGK	liver	—	100.0	MRM	—
Q06136	KDSR	PLALPGAHVVVTGGSSGIGK	lung	—	100.0	MRM	—
Q06210	GFPT1	EILETLIK	lung	—	100.0	MRM	—
Q06210	GFPT1	GYDFESETDTETIAK	dbs	—	100.0	MRM	—
Q06210	GFPT1	GYDFESETDTETIAK	liver	—	100.0	MRM	—
Q06210	GFPT1	GYDFESETDTETIAK	lung	—	100.0	MRM	—
Q06830	PRDX1	LVQAFQFTDK	liver	—	100.0	MRM	—
Q06830	PRDX1	LVQAFQFTDK	lung	—	100.0	MRM	—
Q07954	LRP1	GPVGLAIDFPESK	liver	—	100.0	MRM	—
Q07954	LRP1	GPVGLAIDFPESK	plasma	—	100.0	MRM	—
Q07954	LRP1	YVVISQGLDKPR	liver	—	100.0	MRM	—
Q07954	LRP1	YVVISQGLDKPR	lung	—	100.0	MRM	—
Q07954	LRP1	YVVISQGLDKPR	plasma	—	100.0	MRM	—
Q08174	PCDH1	VTVLDTNDNAPK	lung	—	100.0	MRM	—
Q08257	CRYZ	VFEFGGPEVLK	kidney	—	100.0	MRM	—
Q08426	EHHADH	VSDLAGLDVGWK	liver	—	100.0	MRM	—
Q08493	PDE4C	FGVQTDQEEQLAK	kidney	—	100.0	MRM	—
Q08493	PDE4C	FGVQTDQEEQLAK	liver	—	100.0	MRM	—
Q09666	AHNAK	VDIDVPDVNIEGPDAK	lung	—	100.0	MRM	—
Q09666	AHNAK	VDIDVPDVNIEGPDAK	plasma	—	100.0	MRM	—
Q10471	GALNT2	EIILVDDYSNDPEDGALLGK	lung	—	100.0	MRM	—
Q10472	GALNT1	RPLESYVK	lung	—	100.0	MRM	—
Q11201	ST3GAL1	ILIYHPAFIK	liver	—	100.0	MRM	—
Q12792	TWF1	SHQTGIQASEDVK	liver	—	100.0	MRM	—
Q12792	TWF1	SHQTGIQASEDVK	plasma	—	100.0	MRM	—
Q12864	CDH17	DINDNRPTFLQSK	plasma	—	100.0	MRM	—
Q12907	LMAN2	LVPGPVFGSK	dbs	—	100.0	MRM	—
Q12907	LMAN2	LVPGPVFGSK	kidney	—	100.0	MRM	—
Q12907	LMAN2	LVPGPVFGSK	lung	—	100.0	MRM	—
Q12907	LMAN2	LVPGPVFGSK	plasma	—	100.0	MRM	—
Q13045	FLII	YWVPVEYEEEEK	kidney	—	100.0	MRM	—
Q13045	FLII	YWVPVEYEEEEK	lung	—	100.0	MRM	—
Q13057	COASY	AYAPGGPAYQPVVEAFGTDILHK	liver	—	100.0	MRM	—
Q13085	ACACA	TIQVENSHLILTGAGALNK	kidney	—	100.0	MRM	—
Q13085	ACACA	TIQVENSHLILTGAGALNK	liver	—	100.0	MRM	—
Q13085	ACACA	TVELSIPADPANLDSEAK	kidney	—	100.0	MRM	—
Q13085	ACACA	TVELSIPADPANLDSEAK	liver	—	100.0	MRM	—
Q13085	ACACA	TVELSIPADPANLDSEAK	plasma	—	100.0	MRM	—
Q13085	ACACA	VLIANNGIAAVK	kidney	—	100.0	MRM	—
Q13126	MTAP	EVLIETAK	kidney	—	100.0	MRM	—
Q13126	MTAP	EVLIETAK	liver	—	100.0	MRM	—
Q13228	SELENBP1	LNPNFLVDFGK	lung	—	100.0	MRM	—
Q13228	SELENBP1	LNPNFLVDFGK	plasma	—	100.0	MRM	—
Q13393	PLD1	SLSYPFLLPK	liver	—	100.0	MRM	—

SysQuan Core Database

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