SysQuan Core Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
O43172	PRPF4	GHNTNVGAIVFHPK	liver	—	100.0	None	—
O43172	PRPF4	GHNTNVGAIVFHPK	lung	—	100.0	None	—
O43172	PRPF4	IWTHPGWSPLK	liver	—	100.0	None	—
O43172	PRPF4	IWTHPGWSPLK	lung	—	100.0	None	—
O43172	PRPF4	KPHIYYGSLEEK	kidney	—	100.0	None	—
O43172	PRPF4	KPHIYYGSLEEK	lung	—	100.0	None	—
O43172	PRPF4	NILSVVGTDALK	kidney	—	100.0	None	—
O43172	PRPF4	NILSVVGTDALK	liver	—	100.0	None	—
O43172	PRPF4	QINVSTDDSEVK	kidney	—	100.0	None	—
O43172	PRPF4	QINVSTDDSEVK	liver	—	100.0	None	—
O43172	PRPF4	QINVSTDDSEVK	lung	—	100.0	None	—
O43181	NDUFS4	SYGANFSWNK	liver	—	100.0	None	—
O43182	ARHGAP6	AEESTAIIAVVQK	kidney	—	100.0	None	—
O43182	ARHGAP6	AEESTAIIAVVQK	liver	—	100.0	None	—
O43182	ARHGAP6	AEESTAIIAVVQK	lung	—	100.0	None	—
O43182	ARHGAP6	LLEALQLSLPAEAQSK	liver	—	100.0	None	—
O43182	ARHGAP6	LLEALQLSLPAEAQSK	lung	—	100.0	None	—
O43236	SEPTIN4	ESGTDFPIPAVPPGTDPETEK	kidney	—	100.0	None	—
O43236	SEPTIN4	ESGTDFPIPAVPPGTDPETEK	liver	—	100.0	None	—
O43236	SEPTIN4	ESGTDFPIPAVPPGTDPETEK	lung	—	100.0	None	—
O43236	SEPTIN4	HAVDIEEK	liver	—	100.0	None	—
O43236	SEPTIN4	VNIVPILAK	kidney	—	100.0	None	—
O43236	SEPTIN4	VNIVPILAK	liver	—	100.0	None	—
O43236	SEPTIN4	VNIVPILAK	lung	—	100.0	None	—
O43237	DYNC1LI2	DAVFIPAGWDNEK	liver	—	100.0	None	—
O43237	DYNC1LI2	IAILHENFTTVKPEDAYEDFIVKPPVR	kidney	—	100.0	None	—
O43237	DYNC1LI2	IAILHENFTTVKPEDAYEDFIVKPPVR	liver	—	100.0	None	—
O43237	DYNC1LI2	IAILHENFTTVKPEDAYEDFIVKPPVR	lung	—	100.0	None	—
O43237	DYNC1LI2	NLDLLYK	liver	—	100.0	None	—
O43242	PSMD3	APQHTAVGFK	lung	—	100.0	None	—
O43242	PSMD3	DGVIEASINHEK	kidney	—	100.0	None	—
O43242	PSMD3	FNQVLDQFGEK	lung	—	100.0	None	—
O43242	PSMD3	FNQVLDQFGEK	plasma	—	100.0	None	—
O43242	PSMD3	LNHYVLYK	lung	—	100.0	None	—
O43242	PSMD3	LQLDSPEDAEFIVAK	plasma	—	100.0	None	—
O43242	PSMD3	NYLHYSLYDQAEK	liver	—	100.0	None	—
O43242	PSMD3	NYLHYSLYDQAEK	lung	—	100.0	None	—
O43242	PSMD3	VYEFLDK	kidney	—	100.0	None	—
O43242	PSMD3	VYEFLDK	liver	—	100.0	None	—
O43252	PAPSS1	ELYVPENK	lung	—	100.0	None	—
O43252	PAPSS1	LTPTELK	kidney	—	100.0	None	—
O43252	PAPSS1	RPVLLLHPLGGWTK	kidney	—	100.0	None	—
O43252	PAPSS1	RPVLLLHPLGGWTK	lung	—	100.0	None	—
O43257	ZNHIT1	LPQFDDDADTGK	kidney	—	100.0	None	—
O43257	ZNHIT1	LPQFDDDADTGK	liver	—	100.0	None	—
O43257	ZNHIT1	LPQFDDDADTGK	lung	—	100.0	None	—
O43264	ZW10	GDTTDLLK	lung	—	100.0	None	—
O43264	ZW10	LVLEVLQK	kidney	—	100.0	None	—
O43264	ZW10	NIFHLFHDVVPTYHK	kidney	—	100.0	None	—
O43264	ZW10	NIFHLFHDVVPTYHK	liver	—	100.0	None	—

SysQuan Core Database

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