SysQuan Core Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Missed Cleav.	Assays Available	PTM
P60660	MYL6	HVLVTLGEK	plasma	—	100.0	0	PRM	—
P60709	ACTB	VAPEEHPVLLTEAPLNPK	kidney	—	100.0	0	PRM	—
P60981	DSTN	YALYDASFETK	liver	—	100.0	0	PRM	—
P67936	TPM4	AGLNSLEAVK	plasma	—	100.0	0	PRM	—
Q01105	SET	LNEQASEEILK	lung	—	100.0	0	PRM	—
Q06033	ITIH3	LWAYLTIEQLLEK	kidney	—	100.0	0	PRM	—
Q06033	ITIH3	LWAYLTIEQLLEK	lung	—	100.0	0	PRM	—
Q14126	DSG2	ILDVNDNIPVVENK	kidney	—	100.0	0	PRM	—
Q14126	DSG2	ILDVNDNIPVVENK	plasma	—	100.0	0	PRM	—
Q6UX71	PLXDC2	EIPVLVTQISSTNHPVK	dbs	—	100.0	0	PRM	—
Q86UD1	OAF	ALILGELEK	kidney	—	100.0	0	PRM	—
Q86UD1	OAF	ALILGELEK	liver	—	100.0	0	PRM	—
Q86UD1	OAF	ALILGELEK	lung	—	100.0	0	PRM	—
Q86UD1	OAF	ALILGELEK	plasma	—	100.0	0	PRM	—
Q99497	PARK7	ALVILAK	kidney	—	100.0	0	PRM	—
Q99497	PARK7	ALVILAK	liver	—	100.0	0	PRM	—
Q99497	PARK7	ALVILAK	plasma	—	100.0	0	PRM	—
Q9BXJ4	C1QTNF3	FSTFAGFLLFETK	plasma	—	100.0	0	PRM	—
Q9HBI1	PARVB	QLEEDLYDGQVLQK	kidney	—	100.0	0	PRM	—
Q9HBI1	PARVB	QLEEDLYDGQVLQK	liver	—	100.0	0	PRM	—
Q9HBI1	PARVB	QLEEDLYDGQVLQK	lung	—	100.0	0	PRM	—
Q9HBI1	PARVB	QLEEDLYDGQVLQK	plasma	—	100.0	0	PRM	—
Q9Y4L1	HYOU1	LPATEKPVLLSK	kidney	—	100.0	0	PRM	—
Q9Y4L1	HYOU1	LPATEKPVLLSK	liver	—	100.0	0	PRM	—
Q9Y4L1	HYOU1	LPATEKPVLLSK	lung	—	100.0	0	PRM	—
Q9Y646	CPQ	AIINLAVYGK	dbs	—	100.0	0	PRM	—
Q9Y646	CPQ	AIINLAVYGK	lung	—	100.0	0	PRM	—
Q9Y646	CPQ	AIINLAVYGK	plasma	—	100.0	0	PRM	—
A0A075B6S2	IGKV2D-29	FSGVPDRFSGSGSGTDFTLK	kidney	—	100.0	1	PRM	—
P02679	FGG	KNWIQYK	kidney	—	100.0	1	PRM	—
P02679	FGG	KNWIQYK	liver	—	100.0	1	PRM	—
P02679	FGG	KNWIQYK	lung	—	100.0	1	PRM	—
P24844	MYL9	KGNFNYVEFTR	kidney	—	100.0	1	PRM	—
P24844	MYL9	KGNFNYVEFTR	lung	—	100.0	1	PRM	—
P60709	ACTB	VAPEEHPVLLTEAPLNPK	plasma	—	99.4	0	PRM	—
Q6UX71	PLXDC2	EIPVLVTQISSTNHPVK	plasma	—	99.4	0	PRM	—
P48059	LIMS1	VIEGDVVSALNK	plasma	—	99.2	0	PRM	—
P28072	PSMB6	QVLLGDQIPK	liver	—	99.0	0	PRM	—
Q6UX71	PLXDC2	EIPVLVTQISSTNHPVK	kidney	—	98.9	0	PRM	—
P08758	ANXA5	LYDAYELK	plasma	—	98.7	0	PRM	—
P47755	CAPZA2	EGAAHAFAQYNLDQFTPVK	liver	—	98.3	0	PRM	—
Q14126	DSG2	ILDVNDNIPVVENK	liver	—	98.3	0	PRM	—
P49747	COMP	AVAEPGIQLK	plasma	—	98.2	0	PRM	—
P0C0L4	C4A	DSSTWLTAFVLK	plasma	—	98.1	0	PRM	—
P60709	ACTB	VAPEEHPVLLTEAPLNPK	lung	—	98.1	0	PRM	—
P67936	TPM4	AGLNSLEAVK	lung	—	98.0	0	PRM	—
Q99536	VAT1	TVENVTVFGTASASK	liver	—	97.9	0	PRM	—
Q06033	ITIH3	LWAYLTIEQLLEK	plasma	—	97.9	0	PRM	—
P10599	TXN	VGEFSGANK	lung	—	97.9	0	PRM	—
P63261	ACTG1	VAPEEHPVLLTEAPLNPK	liver	—	97.7	0	PRM	—

SysQuan Core Database

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